RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	ELAVL1	Q15717	326 aa	Known RBP	11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	ZNF585A	Q6P3V2	769 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	PRSS58	Q8IYP2	241 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	OR5D14	Q8NGL3	314 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	TERB2	Q8NHR7	220 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	SPACA5	Q96QH8	159 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	OR2S2	Q9NQN1	319 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	BIN3	Q9NQY0	253 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	CUTC	Q9NTM9	273 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	FAM206A	Q9NX38	181 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	PRR13	Q9NZ81	148 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	SLC5A6	Q9Y289	635 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	MSGN1	A6NI15	193 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	ZNF217	O75362	1048 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	FAM157C	P0CG43	387 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	NPY4R	P50391	375 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	BLK	P51451	505 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	PJVK	Q0ZLH3	352 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	TDG	Q13569	410 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	PCK2	Q16822	640 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	RNF133	Q8WVZ7	376 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	SLAMF6	Q96DU3	332 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	SEC11C	Q9BY50	192 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	WWTR1	Q9GZV5	400 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	PBOV1	Q9GZY1	135 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	MED29	Q9NX70	200 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	LHX6	Q9UPM6	363 aa		11.5	□□□□□ -0.57
DDX11-223	ENST00000542838	IGKV3D-11	A0A0A0MRZ8	115 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	FTCDNL1	E5RQL4	147 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	ZNF93	P35789	620 aa	Predicted RBP	11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	ZNF528	Q3MIS6	628 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	IL34	Q6ZMJ4	242 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	OR10H5	Q8NGA6	315 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	CPNE2	Q96FN4	548 aa	Predicted RBP	11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	TMEM41A	Q96HV5	264 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	HRH4	Q9H3N8	390 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	ZFP57	Q9NU63	452 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	DHCR7	Q9UBM7	475 aa	Known RBP	11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	FAM96B	Q9Y3D0	163 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	SLCO1B1	Q9Y6L6	691 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	PIAS3	Q9Y6X2	628 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	PCDH15	Q96QU1	1955 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	TMEM14DP	A8MWL7	114 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	FARS2	O95363	451 aa	Known RBP	11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	GSK3A	P49840	483 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	DAP3	P51398	398 aa	Known RBP	11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	EFNA3	P52797	238 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	CLDN6	P56747	220 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	POU3F1	Q03052	451 aa	Predicted RBP	11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	MST1L	Q2TV78	715 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	KIAA0895L	Q68EN5	471 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	PGAP1	Q75T13	922 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	SLC29A4	Q7RTT9	530 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	RNF144B	Q7Z419	303 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	BHLHE23	Q8NDY6	225 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	PHF3	Q92576	2039 aa	Known RBP	11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	TMEM230	Q96A57	120 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	KCNK17	Q96T54	332 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	C5orf66	Q9H5L9	145 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	OR5AC2	Q9NZP5	309 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	CYP8B1	Q9UNU6	501 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	GPR132	Q9UNW8	380 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	FLVCR1	Q9Y5Y0	555 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	SFT2D2	O95562	160 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	MPIG6B	O95866	241 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	DRD1	P21728	446 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	CLEC18B	Q6UXF7	455 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	KLHDC7B	Q96G42	594 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	ARL5B	Q96KC2	179 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	LPAR5	Q9H1C0	372 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	COPS7A	Q9UBW8	275 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	ATPIF1	Q9UII2	106 aa		11.49	□□□□□ -0.57
DDX11-223	ENST00000542838	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.49	□□□□□ -0.57
DDX11-223	ENST00000542838		A0A0A6YYD4	124 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	T	O15178	435 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	CHRM2	P08172	466 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	ZNF20	P17024	532 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	PI3	P19957	117 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	B2M	P61769	119 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	PDZK1IP1	Q13113	114 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	NSDHL	Q15738	373 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	GFOD2	Q3B7J2	385 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	PRSS54	Q6PEW0	395 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	GLIPR1L1	Q6UWM5	242 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	TMEM200A	Q86VY9	491 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	C2CD4C	Q8TF44	421 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	C11orf40	Q8WZ69	217 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	DAZL	Q92904	295 aa	Known RBP	11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	CDCA3	Q99618	268 aa	Predicted RBP	11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	COA4	Q9NYJ1	87 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	LPAR3	Q9UBY5	353 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	C2orf72	A6NCS6	295 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	SOCS1	O15524	211 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	ABO	P16442	354 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	CBX5	P45973	191 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	C5orf46	Q6UWT4	87 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	DRAM2	Q6UX65	266 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	H1FNT	Q75WM6	255 aa	Predicted RBP	11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	FAM219A	Q8IW50	185 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms