RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 DAPL1A0PJW8 107 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 TMEM72A0PK05 275 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 A6NIZ1 184 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 J3QLW9 94 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 REM1O75628 298 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 AQP8O94778 261 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 PDGFBP01127 241 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 CLPSP04118 112 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 DAOP14920 347 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF19P17023 458 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 MAPK14Q16539 360 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ACSM3Q53FZ2 586 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 SLC25A30Q5SVS4 291 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 DCST2Q5T1A1 773 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF626Q68DY1 528 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 COLCA1Q6ZS62 124 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 CDRT4Q8N9R6 151 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 FAM98AQ8NCA5 519 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 OR2D3Q8NGH3 330 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 LGALS14Q8TCE9 139 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 RRNAD1Q96FB5 475 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 FAM46AQ96IP4 442 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 SNHG12Q9BXW3 62 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 MTHFD2LQ9H903 347 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 MED20Q9H944 212 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 RNF122Q9H9V4 155 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 MRPS18AQ9NVS2 196 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 TAS2R5Q9NYW4 299 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF629Q9UEG4 869 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 A0A0G2JK05 382 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 KANTRA0A1W2PQU2 76 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 PYCARD-AS1I3L0S3 204 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 HRKO00198 91 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 SLC25A12O75746 678 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 NKX2-2O95096 273 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 CPN1P15169 458 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 MPGP29372 298 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 EMDP50402 254 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 NOVA1P51513 510 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF136P52737 540 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 DCDP81605 110 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 INPP5JQ15735 1006 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 OR2W3Q7Z3T1 314 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF595Q8IYB9 648 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 CMTM4Q8IZR5 234 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 LCORQ96JN0 433 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 LMF2Q9BU23 707 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 PIGMQ9H3S5 423 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 KRCC1Q9NPI7 259 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 TRIM36Q9NQ86 728 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 SEMA4GQ9NTN9 838 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 NTNG1Q9Y2I2 539 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 LY6G6EA0A0G2JKS1 128 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 A0A1W2PPE3 182 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 GXYLT2A0PJZ3 443 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 OR6C76A6NM76 312 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 SNAPC5O75971 98 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 UBBP0CG47 229 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 UBCP0CG48 685 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 MYF5P13349 255 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 CD1CP29017 333 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 AKR1C3P42330 323 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 CLDN12P56749 244 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 RAP1BP61224 184 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 RPS27AP62979 156 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 UBA52P62987 128 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 BTG2P78543 158 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 SRSF3P84103 164 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 PSG6Q00889 435 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 PEA15Q15121 130 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 RSU1Q15404 277 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 NDUFA9Q16795 377 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 MED25Q71SY5 747 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 ZAR1Q86SH2 424 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 BIVMQ86UB2 503 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 KMT5CQ86Y97 462 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 ACBD7Q8N6N7 88 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF433Q8N7K0 673 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 TMEM99Q8N816 258 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 UBAC2Q8NBM4 344 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 OR52R1Q8NGF1 315 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 FCAMRQ8WWV6 532 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 DPF1Q92782 380 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 ORAI1Q96D31 301 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 NOL4LQ96MY1 436 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 BARX1Q9HBU1 254 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 FBXL3Q9UKT7 428 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 WDR45Q9Y484 360 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 U3KQA8 63 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 SPAG17Q6Q759 2223 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 VCANP13611 3396 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 A0A087WUU8 490 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 H0Y8G0 127 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 H0YIG0 161 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 M0R143 59 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 OR2T1O43869 369 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 SC5DO75845 299 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 LYPD3O95274 346 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 VSIG10L2P0DP72 767 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 GLB1P16278 677 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms