RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 LPCAT4Q643R3 524 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 CYB5R2Q6BCY4 276 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 OR8G2PQ6IF36 304 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 PLET1Q6UQ28 207 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 SPESP1Q6UW49 350 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ATRAIDQ6UW56 229 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 UQCC3Q6UW78 93 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 TCF24Q7RTU0 167 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 GRINAQ7Z429 371 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 TMEM135Q86UB9 458 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 P2RY8Q86VZ1 359 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 LRRC28Q86X40 367 aaPredicted RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 ZNF683Q8IZ20 524 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 Q8N377 158 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 SPEM1Q8N4L4 309 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ACBD7Q8N6N7 88 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 GATSQ8NAP1 163 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 NECAP1Q8NC96 275 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 OR51L1Q8NGJ5 315 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 OR1K1Q8NGR3 316 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 OR13C9Q8NGT0 318 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 OR4F5Q8NH21 305 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 TERB2Q8NHR7 220 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 SPPL2AQ8TCT8 520 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 GPX8Q8TED1 209 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ZFP90Q8TF47 636 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 CDS1Q92903 461 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 EMG1Q92979 244 aaKnown RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 DLX4Q92988 240 aaPredicted RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 UPRTQ96BW1 309 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 CMTM5Q96DZ9 223 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 SLC41A3Q96GZ6 507 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 MBOAT7Q96N66 472 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ALKBH3Q96Q83 286 aaPredicted RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 PSMB7Q99436 277 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 PHB2Q99623 299 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ATF6BQ99941 703 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 C7orf50Q9BRJ6 194 aaKnown RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 UTP23Q9BRU9 249 aaKnown RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 SLC35A5Q9BS91 424 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 TMEM121Q9BTD3 319 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 APOOQ9BUR5 198 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 REG4Q9BYZ8 158 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 NKX6-2Q9C056 277 aaPredicted RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 SRRQ9GZT4 340 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 IL22Q9GZX6 179 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 RAB1BQ9H0U4 201 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 TUBB1Q9H4B7 451 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 FBXO44Q9H4M3 255 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ELOVL6Q9H5J4 265 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 FAM96AQ9H5X1 160 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 PLEKHA3Q9HB20 300 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 IL1RL2Q9HB29 575 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 NRN1Q9NPD7 142 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 IL1RAPQ9NPH3 570 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 PLSCR3Q9NRY6 295 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 GCNT4Q9P109 453 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 THAP10Q9P2Z0 257 aaPredicted RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 CTSZQ9UBR2 303 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 LGALS13Q9UHV8 139 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 PHF11Q9UIL8 331 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ANAPC7Q9UJX3 599 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ZNF225Q9UK10 706 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ZNF346Q9UL40 294 aaKnown RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 SCML1Q9UN30 329 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ING4Q9UNL4 249 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 TRAPPC4Q9Y296 219 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 MTCH2Q9Y6C9 303 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 LAMA4Q16363 1823 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 NFASCO94856 1347 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 SETBP1Q9Y6X0 1596 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 N4BP2Q86UW6 1770 aaPredicted RBP2.61□□□□□ -1.99
USP28-210ENST00000542033 YLPM1P49750 1951 aaKnown RBP2.61□□□□□ -1.99
USP28-210ENST00000542033 MAP2P11137 1827 aaKnown RBP2.61□□□□□ -1.99
USP28-210ENST00000542033 CAMSAP1Q5T5Y3 1602 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 PREX1Q8TCU6 1659 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 PXDNLA1KZ92 1463 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 IGLV4-3A0A075B6K6 122 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 A0A087WWV3 80 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 TRAV25A0A0B4J276 109 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 IGHV3-20A0A0C4DH32 117 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 IGHV3-38A0A0C4DH36 116 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 FAM240BA0A1B0GVZ2 78 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 A0A1W2PQL4 384 aaPredicted RBP2.61□□□□□ -1.99
USP28-210ENST00000542033 TMEM218A2RU14 115 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 ZNF724A8MTY0 619 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 C1orf196B1AJZ1 125 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 PRAMEF26H0Y7S4 382 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 H3BMH7 237 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 TEX46H3BTG2 121 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 M0R143 59 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 IMPA2O14732 288 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 LCMT2O60294 686 aaKnown RBP2.61□□□□□ -1.99
USP28-210ENST00000542033 SRPX2O60687 465 aaPredicted RBP2.61□□□□□ -1.99
USP28-210ENST00000542033 TPST2O60704 377 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 DUSP11O75319 330 aaKnown RBP2.61□□□□□ -1.99
USP28-210ENST00000542033 SNNO75324 88 aaPredicted RBP2.61□□□□□ -1.99
USP28-210ENST00000542033 GABARAPO95166 117 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 MMP1P03956 469 aa2.61□□□□□ -1.99
USP28-210ENST00000542033 SMIM10L1P0DMW3 83 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms