RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 OR6C68A6NDL8 312 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 GPR137BO60478 399 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 TOX4O94842 621 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 LCATP04180 440 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 HIST1H1CP16403 213 aaKnown RBP12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 DLX1P56177 255 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 ZNF92Q03936 586 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 HIST2H2BDQ6DRA6 164 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 SDR9C7Q8NEX9 313 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 FANK1Q8TC84 345 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 LHX4Q969G2 390 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 DHRS1Q96LJ7 313 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 WDFY2Q96P53 400 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 PITX2Q99697 317 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 ATF6BQ99941 703 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 RBM4BQ9BQ04 359 aaKnown RBP12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 ADAT1Q9BUB4 502 aaKnown RBP12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 HCAR1Q9BXC0 346 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 CYB5R1Q9UHQ9 305 aa12.78□□□□□ -0.36
CLSTN3-213ENST00000541953 IGHV3OR15-7A0A075B7D8 119 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 CD300LBA8K4G0 201 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 LGALS8O00214 317 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 GSTA4O15217 222 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 ADAM20O43506 726 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 GYPAP02724 150 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 TROVE2P10155 538 aaKnown RBP eCLIP12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 COX4I1P13073 169 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 IRF2P14316 349 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 PROK1P58294 105 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 ZNF362Q5T0B9 420 aaPredicted RBP12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 SMARCD3Q6STE5 483 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 PGAP1Q75T13 922 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 RRM2BQ7LG56 351 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 WDR86Q86TI4 376 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 FAM90A1Q86YD7 464 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 TMEM86BQ8N661 226 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 GCSAMQ8N6F7 178 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 CELF2-AS1Q8N7Q2 184 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 OR11L1Q8NGX0 322 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 FAM162AQ96A26 154 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 MMP27Q9H306 513 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 OR52D1Q9H346 318 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 ACOXLQ9NUZ1 547 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 RNF7Q9UBF6 113 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 RNF114Q9Y508 228 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 V9GYQ6 96 aa12.77□□□□□ -0.37
CLSTN3-213ENST00000541953 IGHV1-69DA0A0B4J2H0 117 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 A0A1B0GUS0 222 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 P2RY10O00398 339 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 OR10H3O60404 316 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 IGHV1-69P01742 117 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 CRYBA1P05813 215 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 CRABP1P29762 137 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 RPS6KA3P51812 740 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 ARF6P62330 175 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 OR8G1Q15617 311 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 GLYATL3Q5SZD4 288 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 ZNF620Q6ZNG0 422 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 Q6ZSV7 163 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 ZBTB46Q86UZ6 589 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 SPRYD4Q8WW59 207 aaPredicted RBP12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 PPP1R3EQ9H7J1 279 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 AURKCQ9UQB9 309 aa12.76□□□□□ -0.37
CLSTN3-213ENST00000541953 M0R135 149 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 RHCEP18577 417 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 PYCR1P32322 319 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 OR8B8Q15620 311 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 TAF9Q16594 264 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 RFX4Q33E94 735 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 PGM2L1Q6PCE3 622 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 DNM1P34Q6PK57 102 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 BTN2A1Q7KYR7 527 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 MRPL21Q7Z2W9 205 aaKnown RBP12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 HDXQ7Z353 690 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 ARPINQ7Z6K5 226 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 CYP4Z1Q86W10 505 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 LNX2Q8N448 690 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 SSMEM1Q8WWF3 244 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 GATAD2BQ8WXI9 593 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 ERGIC1Q969X5 290 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 SEH1LQ96EE3 360 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 ZNF799Q96GE5 643 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 FAM71F1Q96KD3 344 aaPredicted RBP12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 NDEL1Q9GZM8 345 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 C1orf123Q9NWV4 160 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 ERVK-18Q9QC07 812 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 POMT1Q9Y6A1 747 aa12.75□□□□□ -0.37
CLSTN3-213ENST00000541953 OOEPA6NGQ2 149 aa12.74□□□□□ -0.37
CLSTN3-213ENST00000541953 TVP23AA6NH52 213 aa12.74□□□□□ -0.37
CLSTN3-213ENST00000541953 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.74□□□□□ -0.37
CLSTN3-213ENST00000541953 M0QZ24 198 aa12.74□□□□□ -0.37
CLSTN3-213ENST00000541953 DVL1O14640 695 aa12.74□□□□□ -0.37
CLSTN3-213ENST00000541953 CLPXO76031 633 aa12.74□□□□□ -0.37
CLSTN3-213ENST00000541953 TFF1P04155 84 aa12.74□□□□□ -0.37
CLSTN3-213ENST00000541953 SEMG1P04279 462 aa12.74□□□□□ -0.37
CLSTN3-213ENST00000541953 SLC2A1P11166 492 aa12.74□□□□□ -0.37
CLSTN3-213ENST00000541953 IER3P46695 156 aa12.74□□□□□ -0.37
CLSTN3-213ENST00000541953 NPY4RP50391 375 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms