RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 UCP2P55851 309 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 GRB2P62993 217 aaKnown RBP7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 SNTB2Q13425 540 aaKnown RBP7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 EIF2B1Q14232 305 aaKnown RBP7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 RSPO1Q2MKA7 263 aaPredicted RBP7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 KRT80Q6KB66 452 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 ARL9Q6T311 187 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 SETD9Q8NE22 299 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 OR10S1Q8NGN2 331 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 RNF133Q8WVZ7 376 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 CYGBQ8WWM9 190 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 TMEM186Q96B77 213 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 SLAMF6Q96DU3 332 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 C4orf45Q96LM5 186 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 Q96MT0 163 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 JMJD8Q96S16 334 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 CNN2Q99439 309 aaKnown RBP7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 ELOVL3Q9HB03 270 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 ADGRL4Q9HBW9 690 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 TUBG2Q9NRH3 451 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 CLN6Q9NWW5 311 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 DNAJC27Q9NZQ0 273 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 EIF3KQ9UBQ5 218 aaKnown RBP7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 FBXO9Q9UK97 447 aaPredicted RBP7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 TMEM14AQ9Y6G1 99 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 HSPE1-MOB4S4R3N1 261 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 LOC105371242A0A075B767 164 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 H3BSA7 217 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 PHYHO14832 338 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 TMPRSS2O15393 492 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 ABHD16AO95870 558 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 MSMBP08118 114 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 SBK2P0C263 348 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 ALOX5APP20292 161 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 CCNOP22674 350 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 NAA10P41227 235 aaPredicted RBP7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 SLC15A1P46059 708 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 GPR6P46095 362 aaPredicted RBP7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 MTNR1AP48039 350 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 EVX1P49640 407 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 AQP4P55087 323 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 HILS1P60008 231 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 ISL1P61371 349 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 RIN1Q13671 783 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 MAD2L1BPQ15013 274 aaPredicted RBP7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 TMEM154Q6P9G4 183 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 DEGS2Q6QHC5 323 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 COLCA1Q6ZS62 124 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 USP51Q70EK9 711 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF101Q8IZC7 436 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 CLDND2Q8NHS1 167 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 ASB17Q8WXJ9 295 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 SLC7A6Q92536 515 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 TFAP2CQ92754 450 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 SPTSSAQ969W0 71 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 COG8Q96MW5 612 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 DOK1Q99704 481 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 ABHD6Q9BV23 337 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 C1QTNF5Q9BXJ0 243 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 TREM2Q9NZC2 230 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 LAMP5Q9UJQ1 280 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 CMAHPQ9Y471 501 aa7.41□□□□□ -1.22
CLSTN3-212ENST00000541770 M0R135 149 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF254O75437 659 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 WBP4O75554 376 aaKnown RBP7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 CLIC3O95833 236 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 NGFP01138 241 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 APOC1P02654 83 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 MRPL3P09001 348 aaKnown RBP7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 DBHP09172 617 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 ACSM4P0C7M7 580 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 OR2T7P0C7T2 308 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 FAM157BP0CG42 384 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF250P15622 560 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 VHLP40337 213 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 OPRL1P41146 370 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 HSPA13P48723 471 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 TPTEP56180 551 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 IL5RAQ01344 420 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 ROM1Q03395 351 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF718Q3SXZ3 478 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 MIDNQ504T8 468 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 PRR31Q5SQ13 230 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 RGS7BPQ6MZT1 257 aaPredicted RBP7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 KCTD18Q6PI47 426 aaPredicted RBP7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 DRAM2Q6UX65 266 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 RFPL4BQ6ZWI9 263 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 SLC35F2Q8IXU6 374 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 C8orf59Q8N0T1 100 aaPredicted RBP7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 OR51G2Q8NGK0 314 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 OR1J1Q8NGS3 322 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 OR2T27Q8NH04 317 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 OR51F2Q8NH61 342 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 FBLIM1Q8WUP2 373 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 THEM6Q8WUY1 208 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 APH1BQ8WW43 257 aa7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 MRPL24Q96A35 216 aaKnown RBP7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 APOBEC3DQ96AK3 386 aaPredicted RBP7.4□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF799Q96GE5 643 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms