RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TLCD2A6NGC4 264 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 NXPH2O95156 264 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 MPC2O95563 127 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 IGHEP01854 428 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 ICAM2P13598 275 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 PI3P19957 117 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 GJA4P35212 333 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 PPICP45877 212 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 GPR32P1Q8NGA4 272 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 ST8SIA1Q92185 356 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 OR8B4Q96RC9 309 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 BARHL1Q9BZE3 327 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 UCK1Q9HA47 277 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 GPR84Q9NQS5 396 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 RCL1Q9Y2P8 373 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 FGF17O60258 216 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 SFT2D2O95562 160 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 SLC2A1P11166 492 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 AGERQ15109 404 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 ZNF528Q3MIS6 628 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 ZNF574Q6ZN55 896 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 GPR160Q9UJ42 338 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 ELF5Q9UKW6 265 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 ZNF320A2RRD8 509 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 ZNF749O43361 778 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 PEX11BO96011 259 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 ZNF250P15622 560 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 EEF1A2Q05639 463 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 NR0B2Q15466 257 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 GGNBP1Q5YKI7 109 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 ZNF813Q6ZN06 617 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 FGF13Q92913 245 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 CHST6Q9GZX3 395 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 GPR173Q9NS66 373 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 UQCC1Q9NVA1 299 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 LRIT1Q9P2V4 623 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 NOSIPQ9Y314 301 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 KCNE1BA0A087WTH5 132 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 A0A0A6YYD5 115 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 GP1BAP07359 652 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 RFC3P40938 356 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 AKR1C3P42330 323 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 PPP1R3BQ86XI6 285 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 NXPE3Q969Y0 559 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 TOE1Q96GM8 510 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 SSR4P51571 173 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 PPP1CBP62140 327 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 DUSP23Q9BVJ7 150 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 OR51B6Q9H340 312 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 MTCH1Q9NZJ7 389 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 FBXO4Q9UKT5 387 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 RPH3ALQ9UNE2 315 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 SIGLEC7Q9Y286 467 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 WSB1Q9Y6I7 421 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 DDX60LQ5H9U9 1706 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 DEGS1O15121 323 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 TIMP1P01033 207 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 INHBBP09529 407 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 HIST1H3AP68431 136 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 SLC25A30Q5SVS4 291 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 PELI1Q96FA3 418 aa13.55□□□□□ -0.24
SMARCA4-207ENST00000541122 DUS4LO95620 317 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 HNRNPA3P51991 378 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 PRTGQ2VWP7 1150 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 ARSJQ5FYB0 599 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 SPANXN5Q5MJ07 72 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 CMTM2Q8TAZ6 248 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 ABHD1Q96SE0 405 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 TPSD1Q9BZJ3 242 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 PARD6AQ9NPB6 346 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 CBY3A6NI87 242 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 UBE2G1P62253 170 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 BTG2P78543 158 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 OR5M9Q8NGP3 310 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 CNRIP1Q96F85 164 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 EDEM2Q9BV94 578 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 MIXL1Q9H2W2 232 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 OR5V1Q9UGF6 321 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 B9D1Q9UPM9 204 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 C9orf170A2RU37 121 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 AKR7A3O95154 331 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 NTF3P20783 257 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 CD38P28907 300 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 MVDP53602 400 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 LBHQ53QV2 105 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 GTF2H5Q6ZYL4 71 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 SLC16A13Q7RTY0 426 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 OTOSQ8NHW6 89 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 PSENENQ9NZ42 101 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 ZNF98A6NK75 572 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 TCN2P20062 427 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 G0S2P27469 103 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 GABRA2P47869 451 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 SELENOPP49908 381 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 C19orf35Q6ZS72 473 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 Q7L0L9 218 aa13.54□□□□□ -0.24
SMARCA4-207ENST00000541122 PLA2G10O15496 165 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 GATCO43716 136 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 ZIC2O95409 532 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 PCBP3P57721 371 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms