RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 LHFPL3Q86UP9 236 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 ZCCHC24Q8N2G6 241 aaKnown RBP13.26□□□□□ -0.29
DDB1-218ENST00000540784 BPIFB6Q8NFQ5 453 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 FGF20Q9NP95 211 aaPredicted RBP13.26□□□□□ -0.29
DDB1-218ENST00000540784 INPP5EQ9NRR6 644 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 CYSLTR2Q9NS75 346 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 RAB26Q9ULW5 256 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 MYRFQ9Y2G1 1151 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 PDZD2O15018 2839 aa13.26□□□□□ -0.29
DDB1-218ENST00000540784 NOTCH2Q04721 2471 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 AKAP6Q13023 2319 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 POLQO75417 2590 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 C5orf63A6NC05 138 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 XRCC2O43543 280 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 RPP14O95059 124 aaKnown RBP13.25□□□□□ -0.29
DDB1-218ENST00000540784 F12P00748 615 aaPredicted RBP13.25□□□□□ -0.29
DDB1-218ENST00000540784 MYF6P23409 242 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 MMP16P51512 607 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 PSMA6P60900 246 aaKnown RBP13.25□□□□□ -0.29
DDB1-218ENST00000540784 TIGD6Q17RP2 521 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 C6orf141Q5SZD1 244 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 ZNF684Q5T5D7 378 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 LIPNQ5VXI9 398 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 OR2T2Q6IF00 324 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 LAIR2Q6ISS4 152 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 OR2AE1Q8NHA4 323 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 GGHQ92820 318 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 REPIN1Q9BWE0 567 aaKnown RBP13.25□□□□□ -0.29
DDB1-218ENST00000540784 ANKRD60Q9BZ19 345 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 BARX1Q9HBU1 254 aaPredicted RBP13.25□□□□□ -0.29
DDB1-218ENST00000540784 PLCXD1Q9NUJ7 323 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 ZNF319Q9P2F9 582 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 GNG8Q9UK08 70 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 PLCE1Q9P212 2302 aa13.25□□□□□ -0.29
DDB1-218ENST00000540784 EFCAB10A6NFE3 127 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 GGT3PA6NGU5 568 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 J3QLW9 94 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 FAM20BO75063 409 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 NDUFS7O75251 213 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 IGHA1P01876 353 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 ZNF19P17023 458 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 CFL1P23528 166 aaKnown RBP13.24□□□□□ -0.29
DDB1-218ENST00000540784 DCKP27707 260 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 ZNF81P51508 661 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 MMP15P51511 669 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 EFNA4P52798 201 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 GALEQ14376 348 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 CDONQ4KMG0 1287 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 TP53I3Q53FA7 332 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 TMEM255AQ5JRV8 349 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 FAM220AQ7Z4H9 259 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 EGFL6Q8IUX8 553 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 SPRYD4Q8WW59 207 aaPredicted RBP13.24□□□□□ -0.29
DDB1-218ENST00000540784 NEU4Q8WWR8 484 aaPredicted RBP13.24□□□□□ -0.29
DDB1-218ENST00000540784 SPSB4Q96A44 273 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 TMEM80Q96HE8 168 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 REEP6Q96HR9 211 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 SIGLEC11Q96RL6 698 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 ZNF184Q99676 751 aaPredicted RBP13.24□□□□□ -0.29
DDB1-218ENST00000540784 PBOV1Q9GZY1 135 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 TPK1Q9H3S4 243 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 RGCCQ9H4X1 137 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 OPA3Q9H6K4 179 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 FAM206AQ9NX38 181 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 CHCHD3Q9NX63 227 aaKnown RBP13.24□□□□□ -0.29
DDB1-218ENST00000540784 ERVK13-1Q9NX77 482 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 CGGBP1Q9UFW8 167 aaPredicted RBP13.24□□□□□ -0.29
DDB1-218ENST00000540784 PSORS1C1Q9UIG5 152 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 GTF2A1LQ9UNN4 478 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 SNX5Q9Y5X3 404 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 R4GMQ9 66 aa13.24□□□□□ -0.29
DDB1-218ENST00000540784 C17orf100A8MU93 164 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 LOC110117498-PIK3R3F6TDL0 507 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 SPRY3O43610 288 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 XPNPEP2O43895 674 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 PNPP00491 289 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 IGHV4-39P01824 125 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 ANOS1P23352 680 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 OR12D2P58182 307 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 ACTA2P62736 377 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 ACTG2P63267 376 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 ST3GAL4Q11206 333 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 MED21Q13503 144 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 GFOD2Q3B7J2 385 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 ZMAT1Q5H9K5 638 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 OR5AS1Q8N127 324 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 OR8G5Q8NG78 346 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 OR8B12Q8NGG6 310 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 PPP1R14AQ96A00 147 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 CNBD2Q96M20 576 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 SORCS2Q96PQ0 1159 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 ALG8Q9BVK2 526 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 Q9H521 79 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 MSL2Q9HCI7 577 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 TMEM100Q9NV29 134 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 SCN3BQ9NY72 215 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 CNOT2Q9NZN8 540 aaKnown RBP13.23□□□□□ -0.29
DDB1-218ENST00000540784 OR52A1Q9UKL2 312 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 ZDHHC8Q9ULC8 765 aa13.23□□□□□ -0.29
DDB1-218ENST00000540784 CD300LBA8K4G0 201 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms