RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 MMDQ15546 238 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 CATSPERDQ86XM0 798 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 SELENOHQ8IZQ5 122 aaKnown RBP8.48□□□□□ -1.05
CLIP1-214ENST00000540539 TOP6BLQ8N6T0 577 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 OR5L1Q8NGL2 311 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 KCTD13Q8WZ19 329 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 TBX15Q96SF7 602 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 ABHD14AQ9BUJ0 271 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 GPR174Q9BXC1 333 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 ULBP1Q9BZM6 244 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 MED20Q9H944 212 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 NOX4Q9NPH5 578 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 MKKSQ9NPJ1 570 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-214ENST00000540539 NTNG1Q9Y2I2 539 aa8.48□□□□□ -1.05
CLIP1-214ENST00000540539 LAMA3Q16787 3333 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 BLACEA4D250 179 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 PPP5D1E7EU14 171 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 M0QYG6 137 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 CLDN5O00501 218 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 TNFSF13O75888 250 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 IGSF6O95976 241 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 SRMP19623 302 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 TUBG1P23258 451 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 OR3A2P47893 321 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 SLC25A1P53007 311 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 PRKAG1P54619 331 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 NFATC4Q14934 902 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 HIKESHIQ53FT3 197 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 MED25Q71SY5 747 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 SPRED2Q7Z698 418 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 TMEM173Q86WV6 379 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-214ENST00000540539 H1FOOQ8IZA3 346 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-214ENST00000540539 FAM89BQ8N5H3 189 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 OR2AP1Q8NGE2 309 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 ZNF563Q8TA94 476 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 BPIFA2Q96DR5 249 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 SUSD3Q96L08 255 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 HIST1H2AAQ96QV6 131 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 TUBG2Q9NRH3 451 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 RAB22AQ9UL26 194 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 PCYT1BQ9Y5K3 369 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-214ENST00000540539 TIMM13Q9Y5L4 95 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-214ENST00000540539 VWA8A3KMH1 1905 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 TICRRQ7Z2Z1 1910 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 TLCD2A6NGC4 264 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 ZNF860A6NHJ4 632 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 M0QZQ0 153 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 NTN1O95631 604 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 AMY2AP04746 511 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 FGF1P05230 155 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 MRPL3P09001 348 aaKnown RBP8.47□□□□□ -1.05
CLIP1-214ENST00000540539 ALPPL2P10696 532 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 FHITP49789 147 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 PDLIM4P50479 330 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 RUNX2Q13950 521 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 PGGHGQ32M88 737 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 SLC22A6Q4U2R8 563 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 ALG10BQ5I7T1 473 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 METRNLQ641Q3 311 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 FRG2Q64ET8 278 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 FAM219AQ8IW50 185 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 TMEM234Q8WY98 164 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 SDSLQ96GA7 329 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 CIB3Q96Q77 187 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-214ENST00000540539 FRG2BQ96QU4 278 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 PRRX2Q99811 253 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 PBDC1Q9BVG4 233 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 ZNF700Q9H0M5 742 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 CST11Q9H112 138 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 HSPB7Q9UBY9 170 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 HSF4Q9ULV5 492 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 COX11Q9Y6N1 276 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 CHD9Q3L8U1 2897 aa8.47□□□□□ -1.05
CLIP1-214ENST00000540539 PATJQ8NI35 1801 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 CHD7Q9P2D1 2997 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 ZNF705FA8MVS1 300 aaPredicted RBP8.46□□□□□ -1.05
CLIP1-214ENST00000540539 HSD17B6O14756 317 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 DNAJB6O75190 326 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 ZNF705DP0CH99 300 aaPredicted RBP8.46□□□□□ -1.05
CLIP1-214ENST00000540539 ZNF705BP0CI00 300 aaPredicted RBP8.46□□□□□ -1.05
CLIP1-214ENST00000540539 CALCBP10092 127 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 NID1P14543 1247 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 SLC2A5P22732 501 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 ZNF85Q03923 595 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 CNN3Q15417 329 aaKnown RBP8.46□□□□□ -1.05
CLIP1-214ENST00000540539 TAF9Q16594 264 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 SMIM21Q3B7S5 101 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 WFDC8Q8IUA0 241 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 TMEM86AQ8N2M4 240 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 LINC00471Q8N535 108 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 OR4D5Q8NGN0 318 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 OR51F2Q8NH61 342 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 SLC38A5Q8WUX1 472 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 BCL2L2Q92843 193 aaPredicted RBP8.46□□□□□ -1.05
CLIP1-214ENST00000540539 KISS1RQ969F8 398 aaPredicted RBP8.46□□□□□ -1.05
CLIP1-214ENST00000540539 TMEM106AQ96A25 262 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 PINX1Q96BK5 328 aaKnown RBP8.46□□□□□ -1.05
CLIP1-214ENST00000540539 RARRES2Q99969 163 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 TTTY10Q9BZA0 68 aa8.46□□□□□ -1.05
CLIP1-214ENST00000540539 SLC2A9Q9NRM0 540 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms