RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 PRRG3Q9BZD7 231 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 EGLN1Q9GZT9 426 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 USE1Q9NZ43 259 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 DNAJC27Q9NZQ0 273 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 ZNF319Q9P2F9 582 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 ENOPH1Q9UHY7 261 aa15.49■□□□□ 0.07
SNRPA1-203ENST00000540017 TANC2Q9HCD6 1990 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 A0A1B0GWJ7 208 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 PRR32B1ATL7 298 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 H2BFMP0C1H6 154 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 ALOX5APP20292 161 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 HSD11B1P28845 292 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 MVKQ03426 396 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 HFEQ30201 348 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 NXNL2Q5VZ03 156 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 LRRN1Q6UXK5 716 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 MRPL21Q7Z2W9 205 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 C10orf67Q8IYJ2 551 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 CBR4Q8N4T8 237 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 OR13G1Q8NGZ3 307 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 OR2V2Q96R30 315 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 TOR3AQ9H497 397 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 COPS3Q9UNS2 423 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 ABCA2Q9BZC7 2435 aa15.48■□□□□ 0.07
SNRPA1-203ENST00000540017 E9PQ18 207 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 HLA-DPB1P04440 258 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 ANXA2P07355 339 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 SELEP16581 610 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 GZMKP49863 264 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 ZNF121P58317 390 aaPredicted RBP15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 ZIK1Q3SY52 487 aaPredicted RBP15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 LCN1P1Q5VSP4 162 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 FAM57BQ71RH2 274 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 PQLC1Q8N2U9 271 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 RFLNBQ8N5W9 214 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 UBE2FQ969M7 185 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 SLC29A1Q99808 456 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 YIPF3Q9GZM5 350 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 BRD7Q9NPI1 651 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 IL19Q9UHD0 177 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 WIPI2Q9Y4P8 454 aa15.47■□□□□ 0.07
SNRPA1-203ENST00000540017 IGHV3-64DA0A0J9YX35 117 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 CD300LBA8K4G0 201 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 A8MV72 311 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 CLDN25C9JDP6 229 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 F5H5P2 479 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 PSMD9O00233 223 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 TBX1O43435 398 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 TNFSF4P23510 183 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 ALDH3A2P51648 485 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 LMO4P61968 165 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 HPS1Q92902 700 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 SPSB4Q96A44 273 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 SGK3Q96BR1 496 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 MEGF10Q96KG7 1140 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 TTTY10Q9BZA0 68 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 ADGRL4Q9HBW9 690 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 TMEM100Q9NV29 134 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 H2AFY2Q9P0M6 372 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 LAMP5Q9UJQ1 280 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 LRP12Q9Y561 859 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 MALRD1Q5VYJ5 2156 aa15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 SONP18583 2426 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-203ENST00000540017 DYSFO75923 2080 aa15.45■□□□□ 0.06
SNRPA1-203ENST00000540017 LOC100289279A0A1B0GTE1 492 aa15.45■□□□□ 0.06
SNRPA1-203ENST00000540017 ANKRD65E5RJM6 399 aa15.45■□□□□ 0.06
SNRPA1-203ENST00000540017 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-203ENST00000540017 SPRYD4Q8WW59 207 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-203ENST00000540017 C1orf159Q96HA4 380 aa15.45■□□□□ 0.06
SNRPA1-203ENST00000540017 MBOAT4Q96T53 435 aa15.45■□□□□ 0.06
SNRPA1-203ENST00000540017 CNN2Q99439 309 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-203ENST00000540017 GCM1Q9NP62 436 aa15.45■□□□□ 0.06
SNRPA1-203ENST00000540017 GGT3PA6NGU5 568 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 SLC22A31A6NKX4 558 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 FAM157AC9JC47 383 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 XRCC2O43543 280 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 CRLF1O75462 422 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 TNFRSF1AP19438 455 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 CA6P23280 308 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 FAM3AP98173 230 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 MAB21L1Q13394 359 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 KRT77Q7Z794 578 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 OR56B2PQ8NGI1 322 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 OR8J1Q8NGP2 316 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 FAM81AQ8TBF8 368 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 REEP6Q96HR9 211 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 HRASLS5Q96KN8 279 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 SIGLEC11Q96RL6 698 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 TMEM106BQ9NUM4 274 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 HAO2Q9NYQ3 351 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 PPP1R3CQ9UQK1 317 aa15.44■□□□□ 0.06
SNRPA1-203ENST00000540017 MAGEB4O15481 346 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 BAG2O95816 211 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 TGFAP01135 160 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 APOC1P02654 83 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 PMELP40967 661 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 RAD23AP54725 363 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 CDH15P55291 814 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 ROM1Q03395 351 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 GFOD2Q3B7J2 385 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms