RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 IRF3Q14653 427 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 CT45A2Q5DJT8 189 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 TMEM71Q6P5X7 295 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 GLDNQ6ZMI3 551 aaPredicted RBP8.98□□□□□ -0.97
TRAF1-202ENST00000540010 KMT5CQ86Y97 462 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 CARFQ8N187 725 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 ZNF321PQ8N8H1 164 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 ZSCAN4Q8NAM6 433 aaPredicted RBP8.98□□□□□ -0.97
TRAF1-202ENST00000540010 OR1J2Q8NGS2 313 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 NMNAT2Q9BZQ4 307 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 TAF9BQ9HBM6 251 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 ANKRD10Q9NXR5 420 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 NXT1Q9UKK6 140 aaKnown RBP8.98□□□□□ -0.97
TRAF1-202ENST00000540010 MEIKINA0A087WXM9 373 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 PHF1O43189 567 aaPredicted RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 RPS4Y1P22090 263 aaKnown RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 IFITM2Q01629 132 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 FIP1L1Q6UN15 594 aaKnown RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 MUC20Q8N307 709 aaPredicted RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 PTP4A1Q93096 173 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 DNAJB12Q9NXW2 375 aaKnown RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 XRCC3O43542 346 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 NME2P1O60361 137 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 ICOSLGO75144 302 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 ATG12O94817 140 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 OR2F2O95006 317 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 DDAH2O95865 285 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 TK1P04183 234 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 HTR5AP47898 357 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 RAB4BP61018 213 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 CCL7P80098 99 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 OR2F1Q13607 317 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 HIST2H3PS2Q5TEC6 136 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 WDR74Q6RFH5 385 aaPredicted RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 SLC22A25Q6T423 547 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 H1FNTQ75WM6 255 aaPredicted RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 GRAMD2AQ8IUY3 354 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 NKAIN3Q8N8D7 197 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 JAM3Q9BX67 310 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 ADGRL4Q9HBW9 690 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 FANCFQ9NPI8 374 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 CTSFQ9UBX1 484 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 TMEM200CA6NKL6 621 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 CD300LBA8K4G0 201 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 TO15178 435 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 SCRG1O75711 98 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 IFI6P09912 130 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 CHATP28329 748 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 PPICP45877 212 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 IGLV3-21P80748 117 aaPredicted RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 CFHR1Q03591 330 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 SLC17A1Q14916 467 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 PAN3Q58A45 887 aaKnown RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 PDZD11Q5EBL8 140 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 ZNF362Q5T0B9 420 aaPredicted RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 PMS2CLQ68D20 193 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 WDR88Q6ZMY6 472 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 CDH26Q8IXH8 852 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 BAP18Q8IXM2 172 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 IL22RA1Q8N6P7 574 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 SLC30A7Q8NEW0 376 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 OR14A16Q8NHC5 309 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 PTPMT1Q8WUK0 201 aaPredicted RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 NAT6Q93015 286 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 IER2Q9BTL4 223 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 ABHD6Q9BV23 337 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 PAPOLGQ9BWT3 736 aaKnown RBP8.97□□□□□ -0.97
TRAF1-202ENST00000540010 OR5V1Q9UGF6 321 aa8.97□□□□□ -0.97
TRAF1-202ENST00000540010 TXNDC12O95881 172 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 GUSBP08236 651 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 B3GNTL1Q67FW5 361 aaPredicted RBP8.96□□□□□ -0.97
TRAF1-202ENST00000540010 GRINAQ7Z429 371 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 ARHGEF39Q8N4T4 335 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 OR11H7Q8NGC8 314 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 OR56B2PQ8NGI1 322 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 ANGPTL6Q8NI99 470 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 KTI12Q96EK9 354 aaPredicted RBP8.96□□□□□ -0.97
TRAF1-202ENST00000540010 PRSS27Q9BQR3 290 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 SLC19A3Q9BZV2 496 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 METTL9Q9H1A3 318 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 SMCO4Q9NRQ5 59 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 LANCL2Q9NS86 450 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 SLC5A6Q9Y289 635 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 LRP4O75096 1905 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 THADAQ6YHU6 1953 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 A0A0B4J2E0 115 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 A0A1B0GTQ1 180 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 A0A1B0GX12 115 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 E9PQ18 207 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 IGHV3-9P01782 118 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 HLXQ14774 488 aaPredicted RBP8.96□□□□□ -0.97
TRAF1-202ENST00000540010 BATFQ16520 125 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 TRIM61Q5EBN2 209 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 TMEM91Q6ZNR0 172 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 MKXQ8IYA7 352 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 SLC38A6Q8IZM9 456 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 WDSUB1Q8N9V3 476 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 OR52H1Q8NGJ2 320 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 OR5L1Q8NGL2 311 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 SLAMF6Q96DU3 332 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms