RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 DRAM2Q6UX65 266 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 BCL6BQ8N143 479 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-211ENST00000539843 PLPP7Q8NBV4 271 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 FN3KQ9H479 309 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 UFSP2Q9NUQ7 469 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 C14orf119Q9NWQ9 140 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 TAGLN3Q9UI15 199 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 TRAV38-1A0A0B4J264 116 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 A0A1B0GWJ7 208 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 CD300LBA8K4G0 201 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 TNFRSF11BO00300 401 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 XRCC2O43543 280 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 FAM20BO75063 409 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 IFNGP01579 166 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 SEMG1P04279 462 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 IGHV4-38-2P0DP08 117 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 CA6P23280 308 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 FMO3P31513 532 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 SLC15A1P46059 708 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 BLVRAP53004 296 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 MAB21L1Q13394 359 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 WDR25Q64LD2 544 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-211ENST00000539843 PGBD2Q6P3X8 592 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 SPATC1Q76KD6 591 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 BOLLQ8N9W6 283 aaKnown RBP12.78□□□□□ -0.36
UBE3B-211ENST00000539843 CDRT15Q96T59 188 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 ZNF696Q9H7X3 374 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 UNKLQ9H9P5 680 aaKnown RBP12.78□□□□□ -0.36
UBE3B-211ENST00000539843 TBC1D23Q9NUY8 699 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 MRPL15Q9P015 296 aaKnown RBP12.78□□□□□ -0.36
UBE3B-211ENST00000539843 BAIAP2Q9UQB8 552 aa12.78□□□□□ -0.36
UBE3B-211ENST00000539843 A0A1B0GUS0 222 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 hCG_1807616A0A1W2PRN6 198 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 A6NLC8 198 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 ANKRD30BLA7E2S9 258 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 LGALS8O00214 317 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 ATP8B1O43520 1251 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 SNX3O60493 162 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 DCTN3O75935 186 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 CCNB2O95067 398 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 PLATP00750 562 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 APOC1P02654 83 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 SPARCP09486 303 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 GRK5P34947 590 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 RBMXP38159 391 aaKnown RBP12.77□□□□□ -0.37
UBE3B-211ENST00000539843 SLC9A3R2Q15599 337 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 PRR31Q5SQ13 230 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 FAM201AQ5SY85 155 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 PRAMEF6Q5VXH4 476 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 C16orf87Q6PH81 154 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 PNLDC1Q8NA58 520 aaKnown RBP12.77□□□□□ -0.37
UBE3B-211ENST00000539843 OR10S1Q8NGN2 331 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 OR8S1Q8NH09 359 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 NOX4Q9NPH5 578 aa12.77□□□□□ -0.37
UBE3B-211ENST00000539843 PNRC2Q9NPJ4 139 aaKnown RBP12.77□□□□□ -0.37
UBE3B-211ENST00000539843 ZNF878C9JN71 531 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 P2RY10O00398 339 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 BHLHE40O14503 412 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 TMPRSS2O15393 492 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 ADAM20O43506 726 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 HSD11B1P28845 292 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 PYCR1P32322 319 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 DDOSTP39656 456 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 ENTPD1P49961 510 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 PRSS12P56730 875 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 FGF12P61328 243 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 GRB2P62993 217 aaKnown RBP12.76□□□□□ -0.37
UBE3B-211ENST00000539843 PAX2Q02962 417 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 SNCBQ16143 134 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 TUSC1Q2TAM9 212 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 ZNF362Q5T0B9 420 aaPredicted RBP12.76□□□□□ -0.37
UBE3B-211ENST00000539843 METTL11BQ5VVY1 283 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 RASSF6Q6ZTQ3 369 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 DCXRQ7Z4W1 244 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 DEFB107AQ8IZN7 70 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 FTMTQ8N4E7 242 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 FITM2Q8N6M3 262 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 CYB561A3Q8NBI2 242 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 MAP6Q96JE9 813 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 ZNF48Q96MX3 618 aaPredicted RBP12.76□□□□□ -0.37
UBE3B-211ENST00000539843 KCNJ15Q99712 375 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 PCGF1Q9BSM1 259 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 TRIM15Q9C019 465 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 EGLN3Q9H6Z9 239 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 CENPMQ9NSP4 180 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 MRPL22Q9NWU5 206 aaKnown RBP12.76□□□□□ -0.37
UBE3B-211ENST00000539843 CD300AQ9UGN4 299 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 N6AMT1Q9Y5N5 214 aa12.76□□□□□ -0.37
UBE3B-211ENST00000539843 OOEPA6NGQ2 149 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 TVP23AA6NH52 213 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 RIIAD1A6NNX1 92 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 ARHGAP32A7KAX9 2087 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 TBX1O43435 398 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 ZNF3P17036 446 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 CFL1P23528 166 aaKnown RBP12.75□□□□□ -0.37
UBE3B-211ENST00000539843 PSMB10P40306 273 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 PMELP40967 661 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 PRKXP51817 358 aa12.75□□□□□ -0.37
UBE3B-211ENST00000539843 ZNF92Q03936 586 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms