RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 CYB561A3Q8NBI2 242 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 OR10D4PQ8NGN7 298 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 OR14K1Q8NGZ2 314 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 OR8S1Q8NH09 359 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 OR4K15Q8NH41 348 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 PFN4Q8NHR9 129 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 SECTM1Q8WVN6 248 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 KLK6Q92876 244 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 SCAMP4Q969E2 229 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 FAM46BQ96A09 425 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 ZG16BQ96DA0 208 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 MS4A6EQ96DS6 147 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 CPNE2Q96FN4 548 aaPredicted RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 DTD2Q96FN9 168 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 IGSF21Q96ID5 467 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 C4orf45Q96LM5 186 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 PIGQQ9BRB3 760 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 GINS3Q9BRX5 216 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 TMEM231Q9H6L2 316 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 ZDHHC6Q9H6R6 413 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 WDR76Q9H967 626 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 FKRPQ9H9S5 495 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 MRM2Q9UI43 246 aaKnown RBP5.98□□□□□ -1.45
USP28-207ENST00000538475 ZDHHC8Q9ULC8 765 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 GPR132Q9UNW8 380 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 FBXO7Q9Y3I1 522 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 IER3IP1Q9Y5U9 82 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 KCNE3Q9Y6H6 103 aa5.98□□□□□ -1.45
USP28-207ENST00000538475 CACNA1CQ13936 2221 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 TRAV8-7A0A075B6U6 113 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 TRAV27A0A087WT01 109 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 A0A1B0GWA3 101 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 LNP1A1A4G5 178 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 OR2W5A6NFC9 320 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 IFITM10A6NMD0 228 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 C9J4A7 227 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 H0YIZ8 118 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 DCTN6O00399 190 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 ZNF264O43296 627 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 BRINP1O60477 761 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 FCMRO60667 390 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 ZNF354AO60765 605 aaPredicted RBP5.97□□□□□ -1.45
USP28-207ENST00000538475 LDB3O75112 727 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 CA11O75493 328 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 DFFBO76075 338 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 ABLIM3O94929 683 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 LY86O95711 162 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 GPANK1O95872 356 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 MBP02144 154 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 HCKP08631 526 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 PTHLHP12272 177 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 AKR1A1P14550 325 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 ALOX5APP20292 161 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 TLX1P31314 330 aaPredicted RBP5.97□□□□□ -1.45
USP28-207ENST00000538475 AKT2P31751 481 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 THBS4P35443 961 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 NAA10P41227 235 aaPredicted RBP5.97□□□□□ -1.45
USP28-207ENST00000538475 MC3RP41968 323 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 GLIPR1P48060 266 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 RND2P52198 227 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 HNRNPKP61978 463 aaKnown RBP eCLIP5.97□□□□□ -1.45
USP28-207ENST00000538475 LSM6P62312 80 aaKnown RBP5.97□□□□□ -1.45
USP28-207ENST00000538475 SLC35A1P78382 337 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 BTG2P78543 158 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 ROM1Q03395 351 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 ZNF117Q03924 483 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 TNFRSF9Q07011 255 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 GAMTQ14353 236 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 SLC10A1Q14973 349 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 ZNF260Q3ZCT1 412 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 SCGB2B2Q4G0G5 96 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 RTL6Q6ICC9 239 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 RPUSD3Q6P087 351 aaKnown RBP5.97□□□□□ -1.45
USP28-207ENST00000538475 KCTD18Q6PI47 426 aaPredicted RBP5.97□□□□□ -1.45
USP28-207ENST00000538475 BTNL3Q6UXE8 466 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 DPPA3Q6W0C5 159 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 SPNS3Q6ZMD2 512 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 TAF8Q7Z7C8 310 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 ARHGEF39Q8N4T4 335 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 ZNF283Q8N7M2 679 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 SUMF2Q8NBJ7 301 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 POC1AQ8NBT0 407 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 TMEM52Q8NDY8 209 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 OR5L2Q8NGL0 311 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 OR4K13Q8NH42 304 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 OR51A7Q8NH64 312 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 WFDC5Q8TCV5 224 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 DVL3Q92997 716 aaPredicted RBP5.97□□□□□ -1.45
USP28-207ENST00000538475 MR1Q95460 341 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 ARMC5Q96C12 935 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 NTNG2Q96CW9 530 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 RAB39BQ96DA2 213 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 MARS2Q96GW9 593 aaKnown RBP5.97□□□□□ -1.45
USP28-207ENST00000538475 IP6K3Q96PC2 410 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 JMJD8Q96S16 334 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 SOX7Q9BT81 388 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 NUDT9Q9BW91 350 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 CTDSP1Q9GZU7 261 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 NCOR1P1Q9H4R4 102 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms