RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 PSKH1P11801 424 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 CA6P23280 308 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 NOS3P29474 1203 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 PRDX6P30041 224 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 RRM2P31350 389 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 TPTEP56180 551 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 ZNF92Q03936 586 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.03□□□□□ -1.28
USP28-203ENST00000537490 TSPAN31Q12999 210 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 MALLQ13021 153 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 OR8G1Q15617 311 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 ZNF362Q5T0B9 420 aaPredicted RBP7.03□□□□□ -1.28
USP28-203ENST00000537490 PGBD2Q6P3X8 592 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 LYPD4Q6UWN0 246 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 ZNF620Q6ZNG0 422 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 SPATC1Q76KD6 591 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 MRPL21Q7Z2W9 205 aaKnown RBP7.03□□□□□ -1.28
USP28-203ENST00000537490 BOLLQ8N9W6 283 aaKnown RBP7.03□□□□□ -1.28
USP28-203ENST00000537490 CYB561A3Q8NBI2 242 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 OR11L1Q8NGX0 322 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 OR2AE1Q8NHA4 323 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 SPRYD4Q8WW59 207 aaPredicted RBP7.03□□□□□ -1.28
USP28-203ENST00000537490 TMIGD2Q96BF3 282 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 ZNF799Q96GE5 643 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 NSRP1Q9H0G5 558 aaKnown RBP7.03□□□□□ -1.28
USP28-203ENST00000537490 RASSF4Q9H2L5 321 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 PRDM13Q9H4Q3 707 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 EGLN3Q9H6Z9 239 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 TNFRSF19Q9NS68 423 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 RNF7Q9UBF6 113 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 CTSZQ9UBR2 303 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 CD300AQ9UGN4 299 aa7.03□□□□□ -1.28
USP28-203ENST00000537490 GGT3PA6NGU5 568 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 C3orf80F5H4A9 247 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 LGALS8O00214 317 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 ARPC2O15144 300 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 ENSAO43768 121 aaKnown RBP7.02□□□□□ -1.29
USP28-203ENST00000537490 FCN3O75636 299 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 PTBP3O95758 552 aaKnown RBP7.02□□□□□ -1.29
USP28-203ENST00000537490 FABP3P05413 133 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 SFTPBP07988 381 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 HSD17B1P14061 328 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 ZNF823P16415 610 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 OTX1P32242 354 aaPredicted RBP7.02□□□□□ -1.29
USP28-203ENST00000537490 IFNGR2P38484 337 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 SRSF4Q08170 494 aaKnown RBP7.02□□□□□ -1.29
USP28-203ENST00000537490 HSP90B2PQ58FF3 399 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 GLYATL3Q5SZD4 288 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 GPR157Q5UAW9 335 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 DMRTA1Q5VZB9 504 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 RUSC1-AS1Q66K80 236 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 TREML4Q6UXN2 200 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 Q6YL49 198 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 ZNF826PQ6ZT77 177 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 OR51L1Q8NGJ5 315 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 SPTSSAQ969W0 71 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 MCUR1Q96AQ8 359 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 NSMCE2Q96MF7 247 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 TBX15Q96SF7 602 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 CDRT15Q96T59 188 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 PCGF1Q9BSM1 259 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 SLC22A4Q9H015 551 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 SLITRK2Q9H156 845 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 FN3KRPQ9HA64 309 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 IL1RAPQ9NPH3 570 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 ERVK-18Q9QC07 812 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 MAGEL2Q9UJ55 1249 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 KCNG2Q9UJ96 466 aa7.02□□□□□ -1.29
USP28-203ENST00000537490 CENPVL3A0A0U1RRI6 287 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 FAM181BA6NEQ2 426 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 SRRM5B3KS81 715 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 ZNF879B4DU55 563 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 BHLHE40O14503 412 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 ADAM20O43506 726 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 SNX3O60493 162 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 GMDSO60547 372 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 GASTP01350 101 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 GRPP07492 148 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 SLC2A1P11166 492 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 MMP9P14780 707 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 CFHR2P36980 270 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 NPY4RP50391 375 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 PRKXP51817 358 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 HMGA2P52926 109 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 BPIFB3P59826 476 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 RELBQ01201 579 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 POU4F2Q12837 409 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 OR8B8Q15620 311 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 FIP1L1Q6UN15 594 aaKnown RBP7.01□□□□□ -1.29
USP28-203ENST00000537490 DRAM2Q6UX65 266 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 DCXRQ7Z4W1 244 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 ZDHHC21Q8IVQ6 265 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 PGAM4Q8N0Y7 254 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 KIR3DL3Q8N743 410 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 ZNF511Q8NB15 262 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 PLPP7Q8NBV4 271 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 SLC37A3Q8NCC5 494 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 PROKR2Q8NFJ6 384 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 OR9Q2Q8NGE9 314 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 OR56B2PQ8NGI1 322 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms