RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ATP6AP1Q15904 470 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 PGAP1Q75T13 922 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 MRPL21Q7Z2W9 205 aaKnown RBP12.02□□□□□ -0.49
UBE3B-206ENST00000536398 MOGAT3Q86VF5 341 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 GLCCI1Q86VQ1 547 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 OR51F2Q8NH61 342 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 SPRYD4Q8WW59 207 aaPredicted RBP12.02□□□□□ -0.49
UBE3B-206ENST00000536398 LRTOMTQ8WZ04 291 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 GAL3ST1Q99999 423 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 SLC25A19Q9HC21 320 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 KIF17Q9P2E2 1029 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 KLHDC2Q9Y2U9 406 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 AP4S1Q9Y587 144 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 DYSFO75923 2080 aa12.02□□□□□ -0.49
UBE3B-206ENST00000536398 A0A1B0GWJ7 208 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 CD300LBA8K4G0 201 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 ZNF878C9JN71 531 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 TMEM178BH3BS89 294 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 M0R129 80 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 AVPP01185 164 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 CA6P23280 308 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 ZFP36P26651 326 aaKnown RBP12.01□□□□□ -0.49
UBE3B-206ENST00000536398 EPHA2P29317 976 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 NAA10P41227 235 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-206ENST00000536398 CX3CR1P49238 355 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 HOXA4Q00056 320 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-206ENST00000536398 SLC3A1Q07837 685 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 MAB21L1Q13394 359 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 PTGES3Q15185 160 aaKnown RBP12.01□□□□□ -0.49
UBE3B-206ENST00000536398 SNAPC1Q16533 368 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 FAM201AQ5SY85 155 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 ASRGL1Q7L266 308 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 PRSS45Q7RTY3 260 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 BCDIN3DQ7Z5W3 292 aaKnown RBP12.01□□□□□ -0.49
UBE3B-206ENST00000536398 PEG10Q86TG7 708 aaKnown RBP12.01□□□□□ -0.49
UBE3B-206ENST00000536398 LRRC28Q86X40 367 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-206ENST00000536398 RNF133Q8WVZ7 376 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 DVL3Q92997 716 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-206ENST00000536398 SGK3Q96BR1 496 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 DUS3LQ96G46 650 aaKnown RBP12.01□□□□□ -0.49
UBE3B-206ENST00000536398 REPIN1Q9BWE0 567 aaKnown RBP12.01□□□□□ -0.49
UBE3B-206ENST00000536398 SEMA6AQ9H2E6 1030 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 MMADHCQ9H3L0 296 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-206ENST00000536398 G6PC2Q9NQR9 355 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 DNAJC27Q9NZQ0 273 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 ZNF319Q9P2F9 582 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 TANC2Q9HCD6 1990 aa12.01□□□□□ -0.49
UBE3B-206ENST00000536398 GGT3PA6NGU5 568 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 G3V2T6 193 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 PRKYO43930 277 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 ANXA2P07355 339 aaKnown RBP12□□□□□ -0.49
UBE3B-206ENST00000536398 HNF1AP20823 631 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 FASP25445 335 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 OPRL1P41146 370 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 SRP9P49458 86 aaKnown RBP12□□□□□ -0.49
UBE3B-206ENST00000536398 SEC61A1P61619 476 aaKnown RBP12□□□□□ -0.49
UBE3B-206ENST00000536398 GRB2P62993 217 aaKnown RBP12□□□□□ -0.49
UBE3B-206ENST00000536398 LCN2P80188 198 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 APOFQ13790 326 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 FAHD2BQ6P2I3 314 aaPredicted RBP12□□□□□ -0.49
UBE3B-206ENST00000536398 C1orf229Q6ZS94 237 aaPredicted RBP12□□□□□ -0.49
UBE3B-206ENST00000536398 CXXC5Q7LFL8 322 aaKnown RBP12□□□□□ -0.49
UBE3B-206ENST00000536398 PARP8Q8N3A8 854 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 RAB39BQ96DA2 213 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 FAHD2AQ96GK7 314 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 PLEKHA8Q96JA3 519 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 BRD7Q9NPI1 651 aa12□□□□□ -0.49
UBE3B-206ENST00000536398 ARHGAP32A7KAX9 2087 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 ATRQ13535 2644 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 TRAV20A0A0B4J274 112 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 CCDC182A6NF36 153 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 PHF1O43189 567 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-206ENST00000536398 TBX1O43435 398 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 HSD11B1P28845 292 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 SRP14P37108 136 aaKnown RBP11.99□□□□□ -0.49
UBE3B-206ENST00000536398 SLC15A1P46059 708 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 ZNF121P58317 390 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-206ENST00000536398 RPS7P62081 194 aaKnown RBP11.99□□□□□ -0.49
UBE3B-206ENST00000536398 BTG1P62324 171 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 MPPED2Q15777 294 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 PRAMEF6Q5VXH4 476 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 FAM57BQ71RH2 274 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 SHFQ7M4L6 423 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 OTOSQ8NHW6 89 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 THEM6Q8WUY1 208 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 SPSB4Q96A44 273 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 PPP1R3EQ9H7J1 279 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 KRT84Q9NSB2 600 aa11.99□□□□□ -0.49
UBE3B-206ENST00000536398 PRODHO43272 600 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 CIB2O75838 187 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 MRPL3P09001 348 aaKnown RBP11.98□□□□□ -0.49
UBE3B-206ENST00000536398 H2BFMP0C1H6 154 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 ANPEPP15144 967 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 POLR2IP36954 125 aaKnown RBP11.98□□□□□ -0.49
UBE3B-206ENST00000536398 CD200P41217 278 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 RAD23AP54725 363 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 ESRRGP62508 458 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 FAM3AP98173 230 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 OR8G1Q15617 311 aa11.98□□□□□ -0.49
UBE3B-206ENST00000536398 KDM4DQ6B0I6 523 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms