RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 TBC1D15Q8TC07 691 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 Q8TCH9 128 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 GATAD2BQ8WXI9 593 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 TRIM15Q9C019 465 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 ZNF696Q9H7X3 374 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 IL1RAPQ9NPH3 570 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 NOX4Q9NPH5 578 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 CENPMQ9NSP4 180 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 GMPR2Q9P2T1 348 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 CYB5R1Q9UHQ9 305 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 BAIAP2Q9UQB8 552 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 SVEP1Q4LDE5 3571 aa11.09□□□□□ -0.63
CLSTN3-205ENST00000535452 IGLV1-36A0A0B4J1U3 117 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 CD300LBA8K4G0 201 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 H0YL77 283 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 BHLHE40O14503 412 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 MLNRO43193 412 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 ADAM20O43506 726 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 XRCC2O43543 280 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 TOX4O94842 621 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 ECDO95905 644 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 ZNF26P17031 533 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 CA6P23280 308 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 CFL1P23528 166 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 GNALP38405 381 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 DDOSTP39656 456 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 HIST1H3AP68431 136 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 PDCD1Q15116 288 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 SEC23BQ15437 767 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 TIGD6Q17RP2 521 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 SPATS1Q496A3 300 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 PRR31Q5SQ13 230 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 SLC35F1Q5T1Q4 408 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 HIST2H3PS2Q5TEC6 136 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 WDR25Q64LD2 544 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 C8orf82Q6P1X6 216 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 CFAP77Q6ZQR2 320 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 C9orf139Q6ZV77 190 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 HIST2H3AQ71DI3 136 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 ZBTB46Q86UZ6 589 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 CMTM4Q8IZR5 234 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 PGAM4Q8N0Y7 254 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 C7orf34Q96L11 122 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 MRPL15Q9P015 296 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 FAM96BQ9Y3D0 163 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 CDH10Q9Y6N8 788 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 WNK2Q9Y3S1 2297 aa11.08□□□□□ -0.64
CLSTN3-205ENST00000535452 ANXA2P2A6NMY6 339 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 RIIAD1A6NNX1 92 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 LGALS8O00214 317 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 TNFRSF11BO00300 401 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 TMPRSS2O15393 492 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 TBX1O43435 398 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 FAM20BO75063 409 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 DCTN3O75935 186 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 CCNB2O95067 398 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 ANXA2P07355 339 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 GRPP07492 148 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 IGHV4-38-2P0DP08 117 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 HSD17B1P14061 328 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 ZNF3P17036 446 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 FUT4P22083 530 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 NAA10P41227 235 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 FGF12P61328 243 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 GRB2P62993 217 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 SLC9A3R2Q15599 337 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 KLF17Q5JT82 389 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 PRAMEF6Q5VXH4 476 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 ZNF620Q6ZNG0 422 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 ZDHHC21Q8IVQ6 265 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 BCL6BQ8N143 479 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 OR6K6Q8NGW6 343 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 TMIGD2Q96BF3 282 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 DHRS1Q96LJ7 313 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 TEX12Q9BXU0 123 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 SLITRK2Q9H156 845 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 FN3KQ9H479 309 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 TOR3AQ9H497 397 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 TNFRSF19Q9NS68 423 aa11.07□□□□□ -0.64
CLSTN3-205ENST00000535452 OR6C68A6NDL8 312 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 OOEPA6NGQ2 149 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 SRRM5B3KS81 715 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 ZNF879B4DU55 563 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 ZNF878C9JN71 531 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 C3orf80F5H4A9 247 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 DCTN6O00399 190 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 HOXA3O43365 443 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 PAICSP22234 425 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 ENTPD1P49961 510 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 MICBQ29980 383 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 C11orf91Q3C1V1 193 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 SFRP4Q6FHJ7 346 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 TREML4Q6UXN2 200 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 BRD3OSQ6XYD6 125 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 COLCA1Q6ZS62 124 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 SLC36A1Q7Z2H8 476 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 DCXRQ7Z4W1 244 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 TMEM86BQ8N661 226 aa11.06□□□□□ -0.64
CLSTN3-205ENST00000535452 FITM2Q8N6M3 262 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms