RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ST3GAL6Q9Y274 331 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 NUP98P52948 1817 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 ZAR1LA6NP61 321 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 JTBO76095 146 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 ZNF121P58317 390 aaPredicted RBP16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 CEACAM16Q2WEN9 425 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 TIGITQ495A1 244 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 OR2A1Q8NGT9 310 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 GPX8Q8TED1 209 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 TRMT61AQ96FX7 289 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 KPTNQ9Y664 436 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 GABRG2P18507 467 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 DGCR2P98153 550 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 DHODHQ02127 395 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 SPATA46Q5T0L3 261 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 NOXO1Q8NFA2 376 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 ANGPTL7O43827 346 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 GIPP09681 153 aaPredicted RBP16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 ISL1P61371 349 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 SPEM2Q0P670 501 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 ZNF766Q5HY98 468 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 RPL7L1Q6DKI1 246 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 LCN15Q6UWW0 184 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 DRAM2Q6UX65 266 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 OSR2Q8N2R0 312 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 C17orf78Q8N4C9 275 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 DHRS9Q9BPW9 319 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 SLC25A19Q9HC21 320 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 LAMP3Q9UQV4 416 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 TIMM9Q9Y5J7 89 aa16.43■□□□□ 0.22
SFSWAP-203ENST00000535236 C5P01031 1676 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 OR6C68A6NDL8 312 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 LINC01387J3KSC0 135 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 LALBAP00709 142 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 MOB3BQ86TA1 216 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 AKR7LQ8NHP1 331 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 NUDCD2Q8WVJ2 157 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 SLC35D1Q9NTN3 355 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 NRXN3Q9Y4C0 1643 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 PPP1R2P9O14990 202 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 MAGEB4O15481 346 aaPredicted RBP16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 HNF1AP20823 631 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 IGFBP6P24592 240 aaPredicted RBP16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 ZNF90Q03938 601 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 M1APQ8TC57 530 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 RBPMSQ93062 196 aaKnown RBP16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 APOBEC3DQ96AK3 386 aaPredicted RBP16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 ZNF251Q9BRH9 671 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 PTDSS2Q9BVG9 487 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 WSB2Q9NYS7 404 aaPredicted RBP16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 PAQR6Q6TCH4 344 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 SLC25A37Q9NYZ2 338 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 PLA2G3Q9NZ20 509 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 PSENENQ9NZ42 101 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 CACFD1Q9UGQ2 172 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 ZNF835Q9Y2P0 537 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 ASB1Q9Y576 335 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 OR5H8P0DN80 308 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 FUT6P51993 359 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 EIF3IQ13347 325 aaKnown RBP16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 CMTM3Q96MX0 182 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 ALKBH3Q96Q83 286 aaPredicted RBP16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 PCED1AQ9H1Q7 454 aa16.42■□□□□ 0.22
SFSWAP-203ENST00000535236 PPP5D1E7EU14 171 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 OTUD1Q5VV17 481 aaPredicted RBP16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 BTLAQ7Z6A9 289 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 GPR119Q8TDV5 335 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 ST8SIA4Q92187 359 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 MOB3AQ96BX8 217 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 GALMQ96C23 342 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 SMIM19Q96E16 107 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 H7BYZ3 331 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 RPL34P49207 117 aaKnown RBP16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 PLAC9Q5JTB6 97 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 CYHR1Q6ZMK1 362 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 OR13C5Q8NGS8 318 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 FOXB1Q99853 325 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 ONECUT1Q9UBC0 465 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 NCBP2LA6PVI3 153 aaKnown RBP16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 MT-CO3P00414 261 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 MBP02144 154 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 OR5I1Q13606 314 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 CTU2Q2VPK5 515 aaKnown RBP16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 MFSD4AQ8N468 514 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 COX7A2P2O60397 106 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 LRP3O75074 770 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 SLC25A6P12236 298 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 TRA2AQ13595 282 aaKnown RBP eCLIP16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 HAGHQ16775 308 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 SLCO1C1Q9NYB5 712 aa16.41■□□□□ 0.22
SFSWAP-203ENST00000535236 TRBV5-4A0A0C4DH59 114 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 OR2F2O95006 317 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 CD1EP15812 388 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 OR2F1Q13607 317 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 TMEM123Q8N131 208 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 OR2T6Q8NHC8 308 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 DDOQ99489 341 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 CDCA4Q9BXL8 241 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 PIGMQ9H3S5 423 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 ST8SIA5O15466 376 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms