RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 DEFB110Q30KQ9 67 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 CASC10Q5T4H9 136 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 C11orf71Q6IPW1 123 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 IGFL3Q6UXB1 125 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 PHF13Q86YI8 300 aaPredicted RBP4.11□□□□□ -1.75
CASP4-213ENST00000534356 C6orf223Q8N319 242 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 ANKFN1Q8N957 763 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 OR4E2Q8NGC2 313 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 BRSK1Q8TDC3 778 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 UCN3Q969E3 161 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 CXorf40BQ96DE9 158 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 SDHCQ99643 169 aaPredicted RBP4.11□□□□□ -1.75
CASP4-213ENST00000534356 TUBGCP2Q9BSJ2 902 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 XKR8Q9H6D3 395 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 UCK1Q9HA47 277 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 HRASLS2Q9NWW9 162 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 STOX2Q9P2F5 926 aaPredicted RBP4.11□□□□□ -1.75
CASP4-213ENST00000534356 DHCR7Q9UBM7 475 aaKnown RBP4.11□□□□□ -1.75
CASP4-213ENST00000534356 MTRF1LQ9UGC7 380 aaKnown RBP4.11□□□□□ -1.75
CASP4-213ENST00000534356 RWDD2AQ9UIY3 292 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 RPH3ALQ9UNE2 315 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 MRPS33Q9Y291 106 aaKnown RBP4.11□□□□□ -1.75
CASP4-213ENST00000534356 ASF1AQ9Y294 204 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 CACNG2Q9Y698 323 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 V9GY05 133 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 DNAJC13O75165 2243 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
CASP4-213ENST00000534356 A6NIZ1 184 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 OR2AG2A6NM03 316 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 PES1O00541 588 aaKnown RBP4.1□□□□□ -1.75
CASP4-213ENST00000534356 CCL21O00585 134 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 TOX3O15405 576 aaPredicted RBP4.1□□□□□ -1.75
CASP4-213ENST00000534356 POP7O75817 140 aaKnown RBP4.1□□□□□ -1.75
CASP4-213ENST00000534356 CDK14O94921 469 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 STAMBPO95630 424 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 INSP01308 110 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 PNMTP11086 282 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 COX6B1P14854 86 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 LAP3P28838 519 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 RAP1BP61224 184 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 SELENOTP62341 195 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 ZNF763Q0D2J5 394 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 UNC119Q13432 240 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 RIPK1Q13546 671 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 GRB7Q14451 532 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 NCF4Q15080 339 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 DNAJC24Q6P3W2 148 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 SPNS3Q6ZMD2 512 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 TMEM123Q8N131 208 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 FTMTQ8N4E7 242 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 ZADH2Q8N4Q0 377 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 FAM104AQ969W3 186 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 CSPG4P5Q96PW8 444 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 SELENOIQ9C0D9 397 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 POLR1EQ9GZS1 481 aaKnown RBP4.1□□□□□ -1.75
CASP4-213ENST00000534356 CLSTN2Q9H4D0 955 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 RMND5AQ9H871 391 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 SLC25A22Q9H936 323 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 IMP3Q9NV31 184 aaKnown RBP4.1□□□□□ -1.75
CASP4-213ENST00000534356 RBM22Q9NW64 420 aaKnown RBP eCLIP4.1□□□□□ -1.75
CASP4-213ENST00000534356 MEMO1Q9Y316 297 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 SCN3AQ9NY46 2000 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 ZNF407Q9C0G0 2248 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 TLN2Q9Y4G6 2542 aa4.1□□□□□ -1.75
CASP4-213ENST00000534356 OR5K4A6NMS3 321 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 GJE1A6NN92 205 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 NDC80O14777 642 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 KMOO15229 486 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 MFSD11O43934 449 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 CA11O75493 328 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 KLK3P07288 261 aaPredicted RBP4.09□□□□□ -1.75
CASP4-213ENST00000534356 COX5AP20674 150 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 IMPDH1P20839 514 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 PRDX3P30048 256 aaKnown RBP4.09□□□□□ -1.75
CASP4-213ENST00000534356 GABRA4P48169 554 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 HLCSP50747 726 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 GBE1Q04446 702 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 ART3Q13508 389 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 MESDQ14696 234 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 C1orf100Q5SVJ3 147 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 DCUN1D2Q6PH85 259 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 TMEM220Q6QAJ8 160 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 GDPD3Q7L5L3 318 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 TRAPPC5Q8IUR0 188 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 PRSS58Q8IYP2 241 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 RDH10Q8IZV5 341 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 PNKDQ8N490 385 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 OR51S1Q8NGJ8 323 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 PSMF1Q92530 271 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 IL22RA2Q969J5 263 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 C8orf44Q96CB5 159 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 TRIM44Q96DX7 344 aaPredicted RBP4.09□□□□□ -1.75
CASP4-213ENST00000534356 TTC25Q96NG3 672 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 HIST1H4GQ99525 98 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 FOLH1BQ9HBA9 442 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 BTRCQ9Y297 605 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 COL6A5A8TX70 2615 aa4.09□□□□□ -1.75
CASP4-213ENST00000534356 FBN1P35555 2871 aaKnown RBP4.09□□□□□ -1.75
CASP4-213ENST00000534356 HRNRQ86YZ3 2850 aaPredicted RBP4.09□□□□□ -1.75
CASP4-213ENST00000534356 EML6Q6ZMW3 1958 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms