RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 BTG1P62324 171 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 PRB3Q04118 309 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-215ENST00000533946 SFRP4Q6FHJ7 346 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-215ENST00000533946 PLBD1Q6P4A8 553 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 DNM1P34Q6PK57 102 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 SPATA24Q86W54 205 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 ERI1Q8IV48 349 aaKnown RBP8.06□□□□□ -1.12
SSBP3-215ENST00000533946 C11orf53Q8IXP5 236 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 TIGD4Q8IY51 512 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 BOLLQ8N9W6 283 aaKnown RBP8.06□□□□□ -1.12
SSBP3-215ENST00000533946 SEMA6DQ8NFY4 1073 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 OR52L1Q8NGH7 329 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 OR2AJ1Q8NGZ0 328 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 TMEM158Q8WZ71 300 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 RAB1CQ92928 201 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 SGK3Q96BR1 496 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 ZNF48Q96MX3 618 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-215ENST00000533946 TMEM246Q9BRR3 403 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 ABHD6Q9BV23 337 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 REPIN1Q9BWE0 567 aaKnown RBP8.06□□□□□ -1.12
SSBP3-215ENST00000533946 EGLN1Q9GZT9 426 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 C1orf21Q9H246 121 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 PATZ1Q9HBE1 687 aaKnown RBP8.06□□□□□ -1.12
SSBP3-215ENST00000533946 BRD7Q9NPI1 651 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 KRCC1Q9NPI7 259 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-215ENST00000533946 CMC2Q9NRP2 79 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 DDX28Q9NUL7 540 aaKnown RBP8.06□□□□□ -1.12
SSBP3-215ENST00000533946 NDE1Q9NXR1 346 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 IL19Q9UHD0 177 aa8.06□□□□□ -1.12
SSBP3-215ENST00000533946 TRAV20A0A0B4J274 112 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 MDFIC2A0A1B0GVS7 189 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 H3BN98 237 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 GYG2O15488 501 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 PNPP00491 289 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 IGHV4-38-2P0DP08 117 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 ZNF823P16415 610 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 SLC2A5P22732 501 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 POLR2IP36954 125 aaKnown RBP8.05□□□□□ -1.12
SSBP3-215ENST00000533946 NAA10P41227 235 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-215ENST00000533946 ENTPD1P49961 510 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 MNAT1P51948 309 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 SLC25A1P53007 311 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 DLX1P56177 255 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 CSNK2BP67870 215 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 CBX1P83916 185 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 CDK5Q00535 292 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 EIF2B1Q14232 305 aaKnown RBP8.05□□□□□ -1.12
SSBP3-215ENST00000533946 MOGQ16653 247 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 ARL9Q6T311 187 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 CD300LDQ6UXZ3 194 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 CPOQ8IVL8 374 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 OR2T33Q8NG76 320 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 OR56B2PQ8NGI1 322 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 OR13G1Q8NGZ3 307 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 OR2T4Q8NH00 348 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 UTP4Q969X6 686 aaKnown RBP8.05□□□□□ -1.12
SSBP3-215ENST00000533946 DACT3Q96B18 629 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-215ENST00000533946 LYZL4Q96KX0 146 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 C1orf147Q96MC9 270 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-215ENST00000533946 ZNF582Q96NG8 517 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-215ENST00000533946 WACQ9BTA9 647 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 NDEL1Q9GZM8 345 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 C7orf69Q9H7B7 122 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 CYSLTR2Q9NS75 346 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 TMEM100Q9NV29 134 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 CTSZQ9UBR2 303 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 ZNF69Q9UC07 566 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 ATPIF1Q9UII2 106 aa8.05□□□□□ -1.12
SSBP3-215ENST00000533946 VWFP04275 2813 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 CCDC182A6NF36 153 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 AQP12BA6NM10 295 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 C22orf46C9J442 243 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 TNFRSF13BO14836 293 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-215ENST00000533946 SURF4O15260 269 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 MRPL3P09001 348 aaKnown RBP8.04□□□□□ -1.12
SSBP3-215ENST00000533946 EPHA1P21709 976 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 ACKR3P25106 362 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 GSTT1P30711 240 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 FMO3P31513 532 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 GRK5P34947 590 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 LIPAP38571 399 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 CX3CR1P49238 355 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 ZNF121P58317 390 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-215ENST00000533946 FAM3AP98173 230 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 BNIP1Q12981 228 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 FLOT2Q14254 428 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 DCAF12L2Q5VW00 463 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 LRRN1Q6UXK5 716 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 ZNF841Q6ZN19 808 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 FAM57BQ71RH2 274 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 PGAP1Q75T13 922 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 AMIGO2Q86SJ2 522 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 AQP12AQ8IXF9 295 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 ARHGAP24Q8N264 748 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 ZDHHC22Q8N966 263 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 PAPD5Q8NDF8 572 aaKnown RBP8.04□□□□□ -1.12
SSBP3-215ENST00000533946 OR6N2Q8NGY6 317 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 TIMD4Q96H15 378 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 LRGUKQ96M69 825 aa8.04□□□□□ -1.12
SSBP3-215ENST00000533946 KCNJ15Q99712 375 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms