RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.78□□□□□ -1
CAPN1-225ENST00000533704 BOLLQ8N9W6 283 aaKnown RBP8.78□□□□□ -1
CAPN1-225ENST00000533704 OR6N2Q8NGY6 317 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 NANPQ8TBE9 248 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 BCAS4Q8TDM0 211 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 CANT1Q8WVQ1 401 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 C22orf15Q8WYQ4 148 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 DVL3Q92997 716 aaPredicted RBP8.78□□□□□ -1
CAPN1-225ENST00000533704 POP5Q969H6 163 aaKnown RBP8.78□□□□□ -1
CAPN1-225ENST00000533704 SLAMF6Q96DU3 332 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 C1orf21Q9H246 121 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 UFSP2Q9NUQ7 469 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 PDP1Q9P0J1 537 aaPredicted RBP8.78□□□□□ -1
CAPN1-225ENST00000533704 DNHD1Q96M86 4753 aa8.77□□□□□ -1
CAPN1-225ENST00000533704 C5orf63A6NC05 138 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 ERICH4A6NGS2 130 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 AQP12BA6NM10 295 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 CD300LBA8K4G0 201 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 CEACAM18A8MTB9 384 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 IFNL4K9M1U5 179 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 TBX1O43435 398 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 ANXA2P07355 339 aaKnown RBP8.77□□□□□ -1.01
CAPN1-225ENST00000533704 RPS2P15880 293 aaKnown RBP8.77□□□□□ -1.01
CAPN1-225ENST00000533704 CA6P23280 308 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 ANOS1P23352 680 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 GRK5P34947 590 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 SLC25A1P53007 311 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 ZNF92Q03936 586 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 FLOT2Q14254 428 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 DNAL1Q4LDG9 190 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 ARMCX4Q5H9R4 360 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 GLYATL3Q5SZD4 288 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 DRAM2Q6UX65 266 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 TMEM179BQ7Z7N9 219 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 AQP12AQ8IXF9 295 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 C19orf18Q8NEA5 215 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 DEFB108BQ8NET1 73 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 OR11L1Q8NGX0 322 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 INTS14Q96SY0 518 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 SLC6A7Q99884 636 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 ADAT1Q9BUB4 502 aaKnown RBP8.77□□□□□ -1.01
CAPN1-225ENST00000533704 NMNAT2Q9BZQ4 307 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 OR51V1Q9H2C8 321 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 MMP26Q9NRE1 261 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 CMC2Q9NRP2 79 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 DDX28Q9NUL7 540 aaKnown RBP8.77□□□□□ -1.01
CAPN1-225ENST00000533704 DNAJC27Q9NZQ0 273 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 OR5V1Q9UGF6 321 aa8.77□□□□□ -1.01
CAPN1-225ENST00000533704 FBN3Q75N90 2809 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 PPIAL4EA0A075B759 164 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 ZNF878C9JN71 531 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 PPIAL4DF5H284 164 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 TRAPPC2LH3BP13 241 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 FAM20BO75063 409 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 PPIAL4FP0DN26 164 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 PAICSP22234 425 aaKnown RBP8.76□□□□□ -1.01
CAPN1-225ENST00000533704 PRKACGP22612 351 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 GATA3P23771 443 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 HSD11B1P28845 292 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 GSTT1P30711 240 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 PMELP40967 661 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 CX3CR1P49238 355 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 BLVRAP53004 296 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 ACTG1P63261 375 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 GINS1Q14691 196 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 GFOD2Q3B7J2 385 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 DPY19L4Q7Z388 723 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 HS3ST5Q8IZT8 346 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 C1orf87Q8N0U7 546 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 OR56B2PQ8NGI1 322 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 KCNJ15Q99712 375 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 MRI1Q9BV20 369 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 ZNF556Q9HAH1 456 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 TMEM165Q9HC07 324 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 BRD7Q9NPI1 651 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 OPN4Q9UHM6 478 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 PPIAL4AQ9Y536 164 aa8.76□□□□□ -1.01
CAPN1-225ENST00000533704 A0A0A6YYJ9 748 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 ARRDC5A6NEK1 342 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 A6NLC8 198 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 PRR23D1E9PI22 279 aaPredicted RBP8.75□□□□□ -1.01
CAPN1-225ENST00000533704 F5H0A9 414 aaPredicted RBP8.75□□□□□ -1.01
CAPN1-225ENST00000533704 FKBP6O75344 327 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 GRPP07492 148 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 PRR23D2P0DMB1 279 aaPredicted RBP8.75□□□□□ -1.01
CAPN1-225ENST00000533704 CD200P41217 278 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 SLC15A1P46059 708 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 RPS7P62081 194 aaKnown RBP8.75□□□□□ -1.01
CAPN1-225ENST00000533704 GNB2P62879 340 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 GRB2P62993 217 aaKnown RBP8.75□□□□□ -1.01
CAPN1-225ENST00000533704 HOXA4Q00056 320 aaPredicted RBP8.75□□□□□ -1.01
CAPN1-225ENST00000533704 ZNF154Q13106 437 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 MAB21L1Q13394 359 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 GK3PQ14409 553 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 MPPED2Q15777 294 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 TIGD6Q17RP2 521 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 KLHL12Q53G59 568 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 LINC01590Q5TEZ4 76 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 PLBD1Q6P4A8 553 aa8.75□□□□□ -1.01
CAPN1-225ENST00000533704 CD300LDQ6UXZ3 194 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms