RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ABHD12BQ7Z5M8 362 aaPredicted RBP16.16■□□□□ 0.18
SMPD1-208ENST00000533123 SLC22A24Q8N4F4 322 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 TRMT10AQ8TBZ6 339 aaKnown RBP16.16■□□□□ 0.18
SMPD1-208ENST00000533123 CAPSLQ8WWF8 208 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 FAM206AQ9NX38 181 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 RTTNQ86VV8 2226 aa16.16■□□□□ 0.18
SMPD1-208ENST00000533123 CCL21O00585 134 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 IL18BPO95998 194 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 SNRPBP14678 240 aaKnown RBP16.15■□□□□ 0.18
SMPD1-208ENST00000533123 MPGP29372 298 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 ENDOGQ14249 297 aaKnown RBP16.15■□□□□ 0.18
SMPD1-208ENST00000533123 FAM27BQ5VT28 67 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 KLHL24Q6TFL4 600 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 STAC2Q6ZMT1 411 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 SAMD12Q8N8I0 201 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 DTX3Q8N9I9 347 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 DNAAF1Q8NEP3 725 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 OR5H6Q8NGV6 325 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 KCTD12Q96CX2 325 aaKnown RBP16.15■□□□□ 0.18
SMPD1-208ENST00000533123 ZCCHC4Q9H5U6 513 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 TCF7L1Q9HCS4 588 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 DIDO1Q9BTC0 2240 aaKnown RBP16.15■□□□□ 0.18
SMPD1-208ENST00000533123 ZNF878C9JN71 531 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 RGS13O14921 159 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 EIF4EP06730 217 aaKnown RBP16.15■□□□□ 0.18
SMPD1-208ENST00000533123 IGHV1-2P23083 117 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 EVX1P49640 407 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 BAK1Q16611 211 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 HES5Q5TA89 166 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 BCL2L15Q5TBC7 163 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 ZNF544Q6NX49 715 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 LUZP2Q86TE4 346 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 OR8H2Q8N162 312 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 RND1Q92730 232 aa16.15■□□□□ 0.18
SMPD1-208ENST00000533123 CHD6Q8TD26 2715 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 A6NIN4 97 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 FAM25AB3EWG3 89 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 FAM25CB3EWG5 89 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 FAM25GB3EWG6 89 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 CNOT4O95628 575 aaKnown RBP16.14■□□□□ 0.17
SMPD1-208ENST00000533123 ANOS1P23352 680 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 OPRM1P35372 400 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 MMP16P51512 607 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 LSM6P62312 80 aaKnown RBP16.14■□□□□ 0.17
SMPD1-208ENST00000533123 P2RY14Q15391 338 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 ASPHD2Q6ICH7 369 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 TMEM211Q6ICI0 200 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 LRRTM1Q86UE6 522 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 NEK6Q9HC98 313 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 HIVEP3Q5T1R4 2406 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 LOC107986453A0A1B0GWG9 222 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 P2RY10O00398 339 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 LYZL6O75951 148 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 MAS1P04201 325 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 PATE4P0C8F1 98 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 SLC2A1P11166 492 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 TAF13Q15543 124 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 FJX1Q86VR8 437 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 LIX1LQ8IVB5 337 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 SKA3Q8IX90 412 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 GABRG1Q8N1C3 465 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 ASB5Q8WWX0 329 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 FBXO17Q96EF6 278 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 CCDC32Q9BV29 185 aa16.14■□□□□ 0.17
SMPD1-208ENST00000533123 ZNF629Q9UEG4 869 aaPredicted RBP16.14■□□□□ 0.17
SMPD1-208ENST00000533123 PDCD5O14737 125 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 LMX1BO60663 402 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 APEX1P27695 318 aaKnown RBP16.13■□□□□ 0.17
SMPD1-208ENST00000533123 HSD11B1P28845 292 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 PRKXP51817 358 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 TSC22D1Q15714 1073 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 STK11Q15831 433 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 THOC7Q6I9Y2 204 aaKnown RBP16.13■□□□□ 0.17
SMPD1-208ENST00000533123 CELF2-AS1Q8N7Q2 184 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 PRR7Q8TB68 274 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 SOSTQ9BQB4 213 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 DHDHQ9UQ10 334 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 N6AMT1Q9Y5N5 214 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 IFITM5A6NNB3 132 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 B8ZZF3 427 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 TTRP02766 147 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 RAF1P04049 648 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 UQCRFS1P47985 274 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 CLDN12P56749 244 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 PSMA6P60900 246 aaKnown RBP16.13■□□□□ 0.17
SMPD1-208ENST00000533123 PYDC2Q56P42 97 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 XKRXQ6PP77 449 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 ZNF474Q6S9Z5 364 aaPredicted RBP16.13■□□□□ 0.17
SMPD1-208ENST00000533123 ZNF627Q7L945 461 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 SLC16A14Q7RTX9 510 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 OR1K1Q8NGR3 316 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 FGFBP3Q8TAT2 258 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 PBOV1Q9GZY1 135 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 SLITRK2Q9H156 845 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 EXTL2Q9UBQ6 330 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 V9GY05 133 aa16.13■□□□□ 0.17
SMPD1-208ENST00000533123 EEF1E1-BLOC1S5C9J1V9 151 aa16.12■□□□□ 0.17
SMPD1-208ENST00000533123 EEF1E1O43324 174 aaKnown RBP16.12■□□□□ 0.17
SMPD1-208ENST00000533123 RAD51DO75771 328 aa16.12■□□□□ 0.17
SMPD1-208ENST00000533123 FARS2O95363 451 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms