RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 ACBD4Q8NC06 268 aa12.35□□□□□ -0.43
COL16A1-217ENST00000532877 OR8B12Q8NGG6 310 aa12.35□□□□□ -0.43
COL16A1-217ENST00000532877 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
COL16A1-217ENST00000532877 KCNS3Q9BQ31 491 aa12.35□□□□□ -0.43
COL16A1-217ENST00000532877 PBOV1Q9GZY1 135 aa12.35□□□□□ -0.43
COL16A1-217ENST00000532877 ISYNA1Q9NPH2 558 aa12.35□□□□□ -0.43
COL16A1-217ENST00000532877 FRRS1LQ9P0K9 344 aa12.35□□□□□ -0.43
COL16A1-217ENST00000532877 SLC22A13Q9Y226 551 aa12.35□□□□□ -0.43
COL16A1-217ENST00000532877 N6AMT1Q9Y5N5 214 aa12.35□□□□□ -0.43
COL16A1-217ENST00000532877 TRBV2A0A0J9YWF9 115 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.34□□□□□ -0.43
COL16A1-217ENST00000532877 ACOD1A6NK06 481 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 ATP6V1G2-DDX39BF2Z307 99 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 ABCD4O14678 606 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 OGG1O15527 345 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 SIAH2O43255 324 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 TBX1O43435 398 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 SMPD2O60906 423 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 NGFP01138 241 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 TTRP02766 147 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 FAM157BP0CG42 384 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 PCSK6P29122 969 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 CCR9P51686 369 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 BEX5Q5H9J7 111 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 ARMCX4Q5H9R4 360 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 NCMAPQ5T1S8 102 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 LIPKQ5VXJ0 399 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 ARL9Q6T311 187 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 ELMOD2Q8IZ81 293 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 OR52H1Q8NGJ2 320 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 ABHD4Q8TB40 342 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 FAM222BQ8WU58 562 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 UFD1Q92890 307 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 PPP1R14AQ96A00 147 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
COL16A1-217ENST00000532877 SMIM19Q96E16 107 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 PLPPR2Q96GM1 343 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 PGAM5Q96HS1 289 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 OR51B6Q9H340 312 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 ESRP2Q9H6T0 727 aaKnown RBP12.34□□□□□ -0.43
COL16A1-217ENST00000532877 SP140LQ9H930 580 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 TBCCD1Q9NVR7 557 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 ZNF319Q9P2F9 582 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 EIF3KQ9UBQ5 218 aaKnown RBP12.34□□□□□ -0.43
COL16A1-217ENST00000532877 PLCE1Q9P212 2302 aa12.34□□□□□ -0.43
COL16A1-217ENST00000532877 OR4C45A6NMZ5 311 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 DEFB108AA8MXU0 73 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 J3QW42 95 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 CASKO14936 926 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 PLPP2O43688 288 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 ZFPL1O95159 310 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 TFAP2AP05549 437 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 CPEP16870 476 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 CELP19835 753 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 NR1H2P55055 460 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 SLC3A1Q07837 685 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 TPBGQ13641 420 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 TSTQ16762 297 aaKnown RBP12.33□□□□□ -0.44
COL16A1-217ENST00000532877 ODF4Q2M2E3 257 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 GFOD2Q3B7J2 385 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 MEX3BQ6ZN04 569 aaKnown RBP12.33□□□□□ -0.44
COL16A1-217ENST00000532877 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
COL16A1-217ENST00000532877 PGLYRP3Q96LB9 341 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 PDCD1LG2Q9BQ51 273 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 OR10A2Q9H208 303 aa12.33□□□□□ -0.44
COL16A1-217ENST00000532877 A0A0U1RQV5 110 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 TMEM212A6NML5 194 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 UBCP0CG48 685 aaKnown RBP12.32□□□□□ -0.44
COL16A1-217ENST00000532877 LOXP28300 417 aaPredicted RBP12.32□□□□□ -0.44
COL16A1-217ENST00000532877 LIPAP38571 399 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 ALDH3B2P48448 385 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 UCP2P55851 309 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 NKX6-1P78426 367 aaPredicted RBP12.32□□□□□ -0.44
COL16A1-217ENST00000532877 SNTB2Q13425 540 aaKnown RBP12.32□□□□□ -0.44
COL16A1-217ENST00000532877 SSX1Q16384 188 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 GLYATL3Q5SZD4 288 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 ADAM5Q6NVV9 412 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 PHC2Q8IXK0 858 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 ZNF676Q8N7Q3 588 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 OR5AK2Q8NH90 309 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 OR2AE1Q8NHA4 323 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 RADILQ96JH8 1075 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 COMMD4Q9H0A8 199 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 POFUT1Q9H488 388 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 STARD10Q9Y365 291 aa12.32□□□□□ -0.44
COL16A1-217ENST00000532877 ABCA4P78363 2273 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 LOC107986453A0A1B0GWG9 222 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 P2RY10O00398 339 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 CCRL2O00421 344 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 XRCC2O43543 280 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 GPRIN2O60269 458 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 IGLV3-1P01715 115 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 CD1AP06126 327 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 CD3EP07766 207 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 NR4A1P22736 598 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 RAD52P43351 418 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 ERVS71-1P61550 626 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 PPP1CBP62140 327 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 GPR50Q13585 617 aa12.31□□□□□ -0.44
COL16A1-217ENST00000532877 SPATA46Q5T0L3 261 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms