RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 HTR1FP30939 366 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 ZNF121P58317 390 aaPredicted RBP16.85■□□□□ 0.29
CPSF1-209ENST00000532725 SNRPGP62308 76 aaKnown RBP16.85■□□□□ 0.29
CPSF1-209ENST00000532725 DEGS2Q6QHC5 323 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 LRRN1Q6UXK5 716 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 OR2Z1Q8NG97 314 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 OR13G1Q8NGZ3 307 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 OR2AE1Q8NHA4 323 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 FAM81AQ8TBF8 368 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 SPSB4Q96A44 273 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 EGLN1Q9GZT9 426 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 SP140LQ9H930 580 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 ZNF319Q9P2F9 582 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 TMEM14AQ9Y6G1 99 aa16.85■□□□□ 0.29
CPSF1-209ENST00000532725 YLPM1P49750 1951 aaKnown RBP16.84■□□□□ 0.29
CPSF1-209ENST00000532725 DLGAP1O14490 977 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 HEXAP06865 529 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 ANXA2P07355 339 aaKnown RBP16.84■□□□□ 0.29
CPSF1-209ENST00000532725 TACSTD2P09758 323 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 SBK2P0C263 348 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 TNFAIP6P98066 277 aaPredicted RBP16.84■□□□□ 0.29
CPSF1-209ENST00000532725 ROM1Q03395 351 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 TMED1Q13445 227 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 RCN1Q15293 331 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 KCTD18Q6PI47 426 aaPredicted RBP16.84■□□□□ 0.29
CPSF1-209ENST00000532725 Q71RC1 249 aaPredicted RBP16.84■□□□□ 0.29
CPSF1-209ENST00000532725 FAM57BQ71RH2 274 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 MRPL21Q7Z2W9 205 aaKnown RBP16.84■□□□□ 0.29
CPSF1-209ENST00000532725 ASB17Q8WXJ9 295 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 ELMOD3Q96FG2 381 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 MNTQ99583 582 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 NIPAL2Q9H841 368 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 TMEM100Q9NV29 134 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 FAM118AQ9NWS6 357 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 DNAJC27Q9NZQ0 273 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 LRP12Q9Y561 859 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 CACNG2Q9Y698 323 aa16.84■□□□□ 0.29
CPSF1-209ENST00000532725 CD300LBA8K4G0 201 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 H0YL77 283 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 XRCC2O43543 280 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 OCLNQ16625 522 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 TMEM249Q2WGJ8 235 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 NIPBLQ6KC79 2804 aaeCLIP16.83■□□□□ 0.28
CPSF1-209ENST00000532725 KRT77Q7Z794 578 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 SLC35F2Q8IXU6 374 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 BHLHE23Q8NDY6 225 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 OR52H1Q8NGJ2 320 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 OR51G2Q8NGK0 314 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 OR8B4Q96RC9 309 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 CLN6Q9NWW5 311 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 IMPAD1Q9NX62 359 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 IL19Q9UHD0 177 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 GMPPBQ9Y5P6 360 aa16.83■□□□□ 0.28
CPSF1-209ENST00000532725 LOC100130705A0A1B0GUX0 176 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 PSMD9O00233 223 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 SLC16A6O15403 523 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 MLNRO43193 412 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 TBX1O43435 398 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 ENTPD6O75354 484 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 ZNF254O75437 659 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 GABRB1P18505 474 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 TNFSF4P23510 183 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 DCTDP32321 178 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 GPR6P46095 362 aaPredicted RBP16.82■□□□□ 0.28
CPSF1-209ENST00000532725 TRIP10Q15642 601 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 HFEQ30201 348 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 LPCAT4Q643R3 524 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 ZNF679Q8IYX0 411 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 RFLNBQ8N5W9 214 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 SPRYD4Q8WW59 207 aaPredicted RBP16.82■□□□□ 0.28
CPSF1-209ENST00000532725 RFKQ969G6 155 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 MROQ9BYG7 248 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 OPA3Q9H6K4 179 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 BRD7Q9NPI1 651 aa16.82■□□□□ 0.28
CPSF1-209ENST00000532725 LRP5LA4QPB2 252 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 GGT3PA6NGU5 568 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 PPIHO43447 177 aaKnown RBP16.81■□□□□ 0.28
CPSF1-209ENST00000532725 CXCR4P61073 352 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 ELF3P78545 371 aaPredicted RBP16.81■□□□□ 0.28
CPSF1-209ENST00000532725 FAM3AP98173 230 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 POU4F2Q12837 409 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 LRRC36Q1X8D7 754 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 MEDAGQ5VYS4 303 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 ZNF322Q6U7Q0 402 aaPredicted RBP16.81■□□□□ 0.28
CPSF1-209ENST00000532725 GALNT4Q8N4A0 578 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 RHOXF1Q8NHV9 184 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 ITLN1Q8WWA0 313 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 CCL17Q92583 94 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 REEP6Q96HR9 211 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 RDH12Q96NR8 316 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 OR2V2Q96R30 315 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 OR10A2Q9H208 303 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 TREM2Q9NZC2 230 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 AASSQ9UDR5 926 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 HIVEP2P31629 2446 aa16.81■□□□□ 0.28
CPSF1-209ENST00000532725 NSD1Q96L73 2696 aaPredicted RBP16.8■□□□□ 0.28
CPSF1-209ENST00000532725 ACOD1A6NK06 481 aa16.8■□□□□ 0.28
CPSF1-209ENST00000532725 PHYHO14832 338 aa16.8■□□□□ 0.28
CPSF1-209ENST00000532725 WNT9BO14905 357 aa16.8■□□□□ 0.28
CPSF1-209ENST00000532725 CD5LO43866 347 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms