RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 IGFL2Q6UWQ7 119 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 KRTAP11-1Q8IUC1 163 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 MKXQ8IYA7 352 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 ARHGAP18Q8N392 663 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 COX18Q8N8Q8 333 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 WDR31Q8NA23 367 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 OR11H7Q8NGC8 314 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 OR8U1Q8NH10 309 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 DCPSQ96C86 337 aaKnown RBP1.91□□□□□ -2.1
CD44-234ENST00000531873 BTN2A3PQ96KV6 586 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 CEP170P1Q96L14 293 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 FAM19A4Q96LR4 140 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 OR2A5Q96R48 311 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 GPR21Q99679 349 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 TPK1Q9H3S4 243 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 ASB8Q9H765 288 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 AGPAT3Q9NRZ7 376 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 OR51B2Q9Y5P1 312 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 TSSC4Q9Y5U2 329 aaPredicted RBP1.91□□□□□ -2.1
CD44-234ENST00000531873 SCN1AP35498 2009 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 FHOD3Q2V2M9 1422 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 ARID1AO14497 2285 aa1.91□□□□□ -2.1
CD44-234ENST00000531873 LOXHD1Q8IVV2 1947 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 IGHV5-10-1A0A0J9YXX1 117 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 SYCE1LA8MT33 242 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 HACD1B0YJ81 288 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 ANKRD63C9JTQ0 380 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 RNF113AO15541 343 aaKnown RBP1.9□□□□□ -2.11
CD44-234ENST00000531873 RRP8O43159 456 aaKnown RBP1.9□□□□□ -2.11
CD44-234ENST00000531873 ANGPTL7O43827 346 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 ENTPD5O75356 428 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 PLEKHA8P1O95397 391 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 GLAP06280 429 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 THRAP10827 490 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 TCN2P20062 427 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 SSTR5P35346 364 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 VSX2P58304 361 aaPredicted RBP1.9□□□□□ -2.11
CD44-234ENST00000531873 TAS2R39P59534 338 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 OR2B8PP59922 312 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 YWHAEP62258 255 aaKnown RBP1.9□□□□□ -2.11
CD44-234ENST00000531873 TFDP2Q14188 446 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 C6orf183Q5T699 404 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 CD300LGQ6UXG3 332 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 RAB43Q86YS6 212 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 NKAIN4Q8IVV8 208 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 PIFOQ8TCI5 191 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 CIDECQ96AQ7 238 aaPredicted RBP1.9□□□□□ -2.11
CD44-234ENST00000531873 FAM131CQ96AQ9 280 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 TM4SF18Q96CE8 201 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 SLC25A39Q9BZJ4 359 aaPredicted RBP1.9□□□□□ -2.11
CD44-234ENST00000531873 SYNDIG1Q9H7V2 258 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 REEP1Q9H902 201 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 C12orf10Q9HB07 376 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 MED4Q9NPJ6 270 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 LHX9Q9NQ69 397 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 RRAGDQ9NQL2 400 aaPredicted RBP1.9□□□□□ -2.11
CD44-234ENST00000531873 FBXO8Q9NRD0 319 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 RGS18Q9NS28 235 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 STMN3Q9NZ72 180 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 ADA2Q9NZK5 511 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 IFNKQ9P0W0 207 aa1.9□□□□□ -2.11
CD44-234ENST00000531873 TRMT112Q9UI30 125 aaKnown RBP1.9□□□□□ -2.11
CD44-234ENST00000531873 RBMX2Q9Y388 322 aaKnown RBP1.9□□□□□ -2.11
CD44-234ENST00000531873 SMIM26A0A096LP01 95 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 IGHV1-69DA0A0B4J2H0 117 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 OR6C74A6NCV1 312 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 PSMD11O00231 422 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 RFXANKO14593 260 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 GCM2O75603 506 aaPredicted RBP1.89□□□□□ -2.11
CD44-234ENST00000531873 VAPBO95292 243 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 LCA5LO95447 670 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 PAHP00439 452 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 GCGP01275 180 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 CCDC172P0C7W6 258 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 IGHV1-8P0DP01 117 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 HOXB8P17481 243 aaPredicted RBP1.89□□□□□ -2.11
CD44-234ENST00000531873 IGFBP3P17936 291 aaPredicted RBP1.89□□□□□ -2.11
CD44-234ENST00000531873 LCN1P31025 176 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 RBM34P42696 430 aaKnown RBP1.89□□□□□ -2.11
CD44-234ENST00000531873 KIR3DL2P43630 455 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 GPR4P46093 362 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 CDKN2DP55273 166 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 GFERP55789 205 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 PSMC5P62195 406 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 SYCNQ0VAF6 134 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 IRF4Q15306 451 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 RBMY1FQ15415 496 aaKnown RBP1.89□□□□□ -2.11
CD44-234ENST00000531873 NDUFAF6Q330K2 333 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 ORMDL2Q53FV1 153 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 OR2T5Q6IEZ7 315 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 Q6ZR03 302 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 NTM-AS1Q6ZSK4 140 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 PID1Q7Z2X4 250 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 CDKL3Q8IVW4 592 aaPredicted RBP1.89□□□□□ -2.11
CD44-234ENST00000531873 DAW1Q8N136 415 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 Q8N7P7 452 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 OR6N1Q8NGY5 312 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 OR2T29Q8NH02 315 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 NDNFQ8TB73 568 aa1.89□□□□□ -2.11
CD44-234ENST00000531873 C15orf40Q8WUR7 153 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms