RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 REEP1Q9H902 201 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 LYVE1Q9Y5Y7 322 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 DNAJC8O75937 253 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 HOXB6P17509 224 aaKnown RBP18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 PRTN3P24158 256 aa18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 MAGEA2P43356 314 aa18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 BAMBIQ13145 260 aa18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 MAB21L1Q13394 359 aa18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 OR8G1Q15617 311 aa18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 AWAT1Q58HT5 328 aa18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 FAM201AQ5SY85 155 aa18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 BCL6BQ8N143 479 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 OR9Q2Q8NGE9 314 aa18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 IL20Q9NYY1 176 aa18.64■□□□□ 0.57
TRAPPC4-210ENST00000531290 IGHV2-70DA0A0C4DH43 119 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 TVP23AA6NH52 213 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 AQP12BA6NM10 295 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 CD300LBA8K4G0 201 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 BHLHE40O14503 412 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 ATP5HO75947 161 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 CCNB2O95067 398 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 GASTP01350 101 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 PPIAL4GP0DN37 164 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 RAP2AP10114 183 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 CA6P23280 308 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 CD200P41217 278 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 RPS27P42677 84 aaKnown RBP18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 PITPNBP48739 271 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 RASSF6Q6ZTQ3 369 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 AQP12AQ8IXF9 295 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 OR51L1Q8NGJ5 315 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 OR4C15Q8NGM1 316 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 SGMS2Q8NHU3 365 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 Q8TCH9 128 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 DUX5Q96PT3 197 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 DDOQ99489 341 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 ZMAT3Q9HA38 289 aaKnown RBP18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 UFSP2Q9NUQ7 469 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 CLN8Q9UBY8 286 aa18.63■□□□□ 0.57
TRAPPC4-210ENST00000531290 GGT3PA6NGU5 568 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 GNGT2O14610 69 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 ACOT8O14734 319 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 MTNR1AP48039 350 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 PAX2Q02962 417 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 FOXL1Q12952 345 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 FLOT2Q14254 428 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 TAF13Q15543 124 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 TUSC1Q2TAM9 212 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 OR2T5Q6IEZ7 315 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 DRAM2Q6UX65 266 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 DCDC5Q6ZRR9 648 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 SLC37A3Q8NCC5 494 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 OR2T29Q8NH02 315 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 FN3KRPQ9HA64 309 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 TBC1D23Q9NUY8 699 aa18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 SAMHD1Q9Y3Z3 626 aaKnown RBP18.62■□□□□ 0.57
TRAPPC4-210ENST00000531290 DYSFO75923 2080 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 IGHV3OR16-10A0A075B7F0 116 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 KIR2DS1A0A191URI9 304 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 FAM20BO75063 409 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 HKR1P10072 659 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 FMO3P31513 532 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 ZNF92Q03936 586 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 BNIP1Q12981 228 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 SNAI3Q3KNW1 292 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 ZNF362Q5T0B9 420 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 PRAMEF6Q5VXH4 476 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 DCXRQ7Z4W1 244 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 SPATA24Q86W54 205 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 PARP8Q8N3A8 854 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 AQP11Q8NBQ7 271 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 OR10S1Q8NGN2 331 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 OR9Q1Q8NGQ5 310 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 ZNRF4Q8WWF5 429 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 SLC7A6OSQ96CW6 309 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 COPS4Q9BT78 406 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 CHID1Q9BWS9 393 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 TSSK6Q9BXA6 273 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 YY1AP1Q9H869 796 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 CENPMQ9NSP4 180 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 RNF7Q9UBF6 113 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 TENM1Q9UKZ4 2725 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 WNK2Q9Y3S1 2297 aa18.61■□□□□ 0.57
TRAPPC4-210ENST00000531290 DHRS12A0PJE2 317 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 DNAJC9-AS1A6NH13 148 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 SPRY1O43609 319 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 GMDSO60547 372 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 CST1P01037 141 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 SPARCP09486 303 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 IGHV4-38-2P0DP08 117 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 MPPED2Q15777 294 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 KCNJ8Q15842 424 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 ZNF770Q6IQ21 691 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 LNX2Q8N448 690 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 OR8D4Q8NGM9 314 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 OR2AE1Q8NHA4 323 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 SLC25A28Q96A46 364 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 UPRTQ96BW1 309 aa18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 ZNF48Q96MX3 618 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC4-210ENST00000531290 NUDT16L1Q9BRJ7 211 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms