RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 OR9Q2Q8NGE9 314 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 SLC25A28Q96A46 364 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 ZNF48Q96MX3 618 aaPredicted RBP17.46■□□□□ 0.39
SMPD1-204ENST00000530395 ADAT1Q9BUB4 502 aaKnown RBP17.46■□□□□ 0.39
SMPD1-204ENST00000530395 TRIM15Q9C019 465 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 FN3KRPQ9HA64 309 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 UFSP2Q9NUQ7 469 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 TBC1D23Q9NUY8 699 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 IL20Q9NYY1 176 aa17.46■□□□□ 0.39
SMPD1-204ENST00000530395 GGT3PA6NGU5 568 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 TVP23AA6NH52 213 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 CD300LBA8K4G0 201 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 FAM20BO75063 409 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 RNASE1P07998 156 aaKnown RBP17.45■□□□□ 0.38
SMPD1-204ENST00000530395 CA6P23280 308 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 MNAT1P51948 309 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 DRAM2Q6UX65 266 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 CYP2R1Q6VVX0 501 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 C9orf139Q6ZV77 190 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 NUDT16L1Q9BRJ7 211 aaKnown RBP17.45■□□□□ 0.38
SMPD1-204ENST00000530395 BTBD10Q9BSF8 475 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 COPS4Q9BT78 406 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 ACTR3BQ9P1U1 418 aa17.45■□□□□ 0.38
SMPD1-204ENST00000530395 IGHV3OR16-10A0A075B7F0 116 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 TRAV40A0A0B4J280 105 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 KIR2DS1A0A191URI9 304 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 CLDN34H7C241 214 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 GMDSO60547 372 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 CCNB2O95067 398 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 SPARCP09486 303 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 EGR1P18146 543 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 FMO3P31513 532 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 RPS27P42677 84 aaKnown RBP17.44■□□□□ 0.38
SMPD1-204ENST00000530395 ZNF92Q03936 586 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 TAF13Q15543 124 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 SNAI3Q3KNW1 292 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 WDR25Q64LD2 544 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-204ENST00000530395 RASSF6Q6ZTQ3 369 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 DCXRQ7Z4W1 244 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 SLC37A3Q8NCC5 494 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 OR51L1Q8NGJ5 315 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 OR10S1Q8NGN2 331 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 DACT3Q96B18 629 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-204ENST00000530395 DDOQ99489 341 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 ZNF747Q9BV97 191 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 MMADHCQ9H3L0 296 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-204ENST00000530395 OPA3Q9H6K4 179 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 MRPL15Q9P015 296 aaKnown RBP17.44■□□□□ 0.38
SMPD1-204ENST00000530395 RNF7Q9UBF6 113 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 BAIAP2Q9UQB8 552 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 PCDHGB1Q9Y5G3 927 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 COMMD3-BMI1R4GMX3 469 aa17.44■□□□□ 0.38
SMPD1-204ENST00000530395 PLATP00750 562 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 ATP6V1B2P21281 511 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 OTX1P32242 354 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-204ENST00000530395 ENTPD1P49961 510 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 NPY4RP50391 375 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 GNGT1P63211 74 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 MZT1Q08AG7 82 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 MPPED2Q15777 294 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 GLYATL3Q5SZD4 288 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 SHISA2Q6UWI4 295 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 LYPD2Q6UXB3 125 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 LNX2Q8N448 690 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 FITM2Q8N6M3 262 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 AQP11Q8NBQ7 271 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 PLPP7Q8NBV4 271 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 OR8D4Q8NGM9 314 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 OR9Q1Q8NGQ5 310 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 OR2AE1Q8NHA4 323 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 C1orf147Q96MC9 270 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-204ENST00000530395 TSSK6Q9BXA6 273 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 TRIM36Q9NQ86 728 aa17.43■□□□□ 0.38
SMPD1-204ENST00000530395 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.42■□□□□ 0.38
SMPD1-204ENST00000530395 ENSAO43768 121 aaKnown RBP17.42■□□□□ 0.38
SMPD1-204ENST00000530395 GASTP01350 101 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 MAGEA2P43356 314 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 SLC9A3R2Q15599 337 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 CD276Q5ZPR3 534 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 ZNF770Q6IQ21 691 aaPredicted RBP17.42■□□□□ 0.38
SMPD1-204ENST00000530395 LYPD4Q6UWN0 246 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 PIGWQ7Z7B1 504 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 SPERTQ8NA61 448 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 C19orf18Q8NEA5 215 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 OR2T33Q8NG76 320 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 SLAMF6Q96DU3 332 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 TECTBQ96PL2 329 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 KCNJ15Q99712 375 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 MAGIXQ9H6Y5 334 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 KIF17Q9P2E2 1029 aa17.42■□□□□ 0.38
SMPD1-204ENST00000530395 ZNF878C9JN71 531 aa17.41■□□□□ 0.38
SMPD1-204ENST00000530395 PTBP3O95758 552 aaKnown RBP17.41■□□□□ 0.38
SMPD1-204ENST00000530395 IFNGP01579 166 aa17.41■□□□□ 0.38
SMPD1-204ENST00000530395 PSMB10P40306 273 aa17.41■□□□□ 0.38
SMPD1-204ENST00000530395 PRKXP51817 358 aa17.41■□□□□ 0.38
SMPD1-204ENST00000530395 BLVRAP53004 296 aa17.41■□□□□ 0.38
SMPD1-204ENST00000530395 SLC25A1P53007 311 aa17.41■□□□□ 0.38
SMPD1-204ENST00000530395 CRMP1Q14194 572 aa17.41■□□□□ 0.38
SMPD1-204ENST00000530395 ZNF362Q5T0B9 420 aaPredicted RBP17.41■□□□□ 0.38
SMPD1-204ENST00000530395 ARHGAP24Q8N264 748 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms