RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 ABHD6Q9BV23 337 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 FNDC11Q9BVV2 318 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 RSPO3Q9BXY4 272 aaPredicted RBP3.36□□□□□ -1.87
C11orf54-208ENST00000530279 OR11A1Q9GZK7 315 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 NDEL1Q9GZM8 345 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 OPN3Q9H1Y3 402 aaPredicted RBP3.36□□□□□ -1.87
C11orf54-208ENST00000530279 C1orf21Q9H246 121 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 CXXC4Q9H2H0 198 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 PPIL3Q9H2H8 161 aaKnown RBP3.36□□□□□ -1.87
C11orf54-208ENST00000530279 KCNN2Q9H2S1 579 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 FN3KQ9H479 309 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 PLEKHF2Q9H8W4 249 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 ZNF229Q9UJW7 825 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 FBXL3Q9UKT7 428 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 SAMD4AQ9UPU9 718 aaKnown RBP3.36□□□□□ -1.87
C11orf54-208ENST00000530279 SNX5Q9Y5X3 404 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 PDZD2O15018 2839 aa3.36□□□□□ -1.87
C11orf54-208ENST00000530279 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.36□□□□□ -1.872e-7■■■■□ 23.3
C11orf54-208ENST00000530279 HEATR1Q9H583 2144 aaKnown RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 MED13LQ71F56 2210 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 KIAA1549Q9HCM3 1950 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 IGKV1D-42A0A075B6H8 117 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 ARPC4-TTLL3A0A0A6YYG9 625 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 A0A0U1RQK1 487 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 ZNF320A2RRD8 509 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 TRIM64A6NGJ6 449 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 TRIM64BA6NI03 449 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 DEFB108AA8MXU0 73 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 PRR32B1ATL7 298 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 ZNF587BE7ETH6 402 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 SLC33A1O00400 549 aaPredicted RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 CXCR6O00574 342 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 NME4O00746 187 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 PLPP3O14495 311 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 TNFRSF13BO14836 293 aaPredicted RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 GMFGO60234 142 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 GPR137BO60478 399 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 TPST2O60704 377 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 KRT36O76013 467 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 LYPD3O95274 346 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 BGLAPP02818 100 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 MT-ND1P03886 318 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 RAF1P04049 648 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 ASAH2BP0C7U1 165 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 PSG1P11464 419 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 CALB2P22676 271 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 HTR2AP28223 471 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 AQP1P29972 269 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 COMPP49747 757 aaPredicted RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 GSK3BP49841 420 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 NUDT2P50583 147 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 ALDH3A2P51648 485 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 ZNF133P52736 654 aaPredicted RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 CRYBA2P53672 197 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 SNU13P55769 128 aaKnown RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 PRPS1P60891 318 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 PSME3P61289 254 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 POU3F1Q03052 451 aaPredicted RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 LIPEQ05469 1076 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 PUDPQ08623 228 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 ACSM1Q08AH1 577 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 BNIP2Q12982 314 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 SELPLGQ14242 412 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 CAPRIN1Q14444 709 aaKnown RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 HNF4GQ14541 408 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 OR7A5Q15622 319 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 ZNF74Q16587 644 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 GLIPR1L2Q4G1C9 344 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 IFI44LQ53G44 452 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 CYBRD1Q53TN4 286 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 PRR27Q6MZM9 219 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 TTC33Q6PID6 262 aaPredicted RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 PAMR1Q6UXH9 720 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 C18orf65Q6ZTR6 163 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 CREB3L2Q70SY1 520 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 BHLHA15Q7RTS1 189 aaPredicted RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 OLIG3Q7RTU3 272 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 AAED1Q7RTV5 226 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 NUFIP2Q7Z417 695 aaKnown RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 CYP4Z1Q86W10 505 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 CARM1Q86X55 608 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 CDC20BQ86Y33 519 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 C1orf174Q8IYL3 243 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 CDK20Q8IZL9 346 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 LINC00471Q8N535 108 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 TMEM99Q8N816 258 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 SMYD1Q8NB12 490 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 CCDC197Q8NCU1 140 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 ATP6V1C2Q8NEY4 427 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 OR5J2Q8NH18 312 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 OR6X1Q8NH79 312 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 HIST1H2ACQ93077 130 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 PRRC1Q96M27 445 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 ZNF385AQ96PM9 386 aaKnown RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 GFI1Q99684 422 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 KCTD14Q9BQ13 255 aaPredicted RBP3.35□□□□□ -1.87
C11orf54-208ENST00000530279 ACTR6Q9GZN1 396 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 LRMDAQ9H2I8 198 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 B3GAT2Q9NPZ5 323 aa3.35□□□□□ -1.87
C11orf54-208ENST00000530279 NANSQ9NR45 359 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms