RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 EGR4Q05215 589 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 SNTB2Q13425 540 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 KRR1Q13601 381 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 C3orf36Q3SXR2 165 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 ZNF362Q5T0B9 420 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 SLC35F1Q5T1Q4 408 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 C1QTNF12Q5T7M4 302 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 LCN1P1Q5VSP4 162 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 TMEM225Q6GV28 225 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 CD200R1LQ6Q8B3 271 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 PEG10Q86TG7 708 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 LHFPL3Q86UP9 236 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 ZBTB46Q86UZ6 589 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 MDP1Q86V88 176 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 LRP11Q86VZ4 500 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 CENPSQ8N2Z9 138 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 OR4F15Q8NGB8 312 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 OR51A7Q8NH64 312 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 GATAD2BQ8WXI9 593 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 PTP4A1Q93096 173 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 TMEM186Q96B77 213 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 OTULINQ96BN8 352 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 MRPL48Q96GC5 212 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 KCTD7Q96MP8 289 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 ZNF75AQ96N20 296 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 KCNS3Q9BQ31 491 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 PTDSS2Q9BVG9 487 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 SSBP4Q9BWG4 385 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 MROQ9BYG7 248 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 LINC00470Q9BZP3 86 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 C6orf62Q9GZU0 229 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 ESM1Q9NQ30 184 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 HIF1ANQ9NWT6 349 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 TXNL4BQ9NX01 149 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 BABAM2Q9NXR7 383 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 TREM2Q9NZC2 230 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 B3GAT1Q9P2W7 334 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 IL20RAQ9UHF4 553 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 SF3B6Q9Y3B4 125 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 SPEF1Q9Y4P9 236 aa7.31□□□□□ -1.24
TGFBR3-208ENST00000529608 TRRAPQ9Y4A5 3859 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 TRAV27A0A087WT01 109 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 A0A0A6YYJ9 748 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 LOC100996750A0A140TA64 210 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 IQCMA0A1B0GVH7 501 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 DAPL1A0PJW8 107 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 FAM183AA6NL82 134 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 C12orf71A8MTZ7 269 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 B4DSR2 109 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 RPL36A-HNRNPH2H7BZ11 118 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 KRT33AO76009 404 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 NCR1O76036 304 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 PPP1R3DO95685 299 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 MT-ND5P03915 603 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 SBK2P0C263 348 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 SLC2A5P22732 501 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 CXCR1P25024 350 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 RPS19P39019 145 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 ALDH3B1P43353 468 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 CLDN17P56750 224 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 HILS1P60008 231 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 LMO4P61968 165 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 FHL1Q13642 323 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 GALEQ14376 348 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 TRIM16LQ309B1 348 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 SLC35D3Q5M8T2 416 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 SPANXN2Q5MJ10 180 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 OR2G6Q5TZ20 316 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 ZNF322Q6U7Q0 402 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 CCDC190Q86UF4 302 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 GLCCI1Q86VQ1 547 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 EGFL6Q8IUX8 553 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 C3orf56Q8N813 242 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 FAM169BQ8N8A8 192 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 BBS1Q8NFJ9 593 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 OR51G2Q8NGK0 314 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 FAM216AQ8WUB2 273 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 SPRYD4Q8WW59 207 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 WFDC12Q8WWY7 111 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 AP3S1Q92572 193 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 CEP19Q96LK0 163 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 ERMAPQ96PL5 475 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 GPX7Q96SL4 187 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 ZNF649Q9BS31 505 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 KRTAP4-6Q9BYQ5 205 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 RNF167Q9H6Y7 350 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 GPR35Q9HC97 309 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 DYNLRB1Q9NP97 96 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 NRIP3Q9NQ35 241 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 B3GNT2Q9NY97 397 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 ZNF224Q9NZL3 707 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 NOX1Q9Y5S8 564 aa7.3□□□□□ -1.24
TGFBR3-208ENST00000529608 LOC105371242A0A075B767 164 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 CCDC182A6NF36 153 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 A8MVM7 634 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 RP2O75695 350 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 UPK1BO75841 260 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 CDRT1O95170 752 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 APOL3O95236 402 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 HLA-HP01893 362 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms