RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 UFD1Q92890 307 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 MRPL24Q96A35 216 aaKnown RBP6.85□□□□□ -1.31
SSBP3-211ENST00000528787 SPSB4Q96A44 273 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 MARVELD3Q96A59 401 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 REEP6Q96HR9 211 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 HIST1H2AAQ96QV6 131 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 EGLN1Q9GZT9 426 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 PBOV1Q9GZY1 135 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 NPAP1Q9NZP6 1156 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 MRPL15Q9P015 296 aaKnown RBP6.85□□□□□ -1.31
SSBP3-211ENST00000528787 MRM2Q9UI43 246 aaKnown RBP6.85□□□□□ -1.31
SSBP3-211ENST00000528787 OR52A1Q9UKL2 312 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 HHLA2Q9UM44 414 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 COPS3Q9UNS2 423 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 PKDREJQ9NTG1 2253 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 DOPEY2Q9Y3R5 2298 aa6.85□□□□□ -1.31
SSBP3-211ENST00000528787 A0A1W2PPW3 197 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF503-AS2A6NEH8 195 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 ATP6V1G2-DDX39BF2Z307 99 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 C19orf84I3L1E1 186 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 M0R233 179 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 MAGEB3O15480 346 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 SYT7O43581 403 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 TIMM8AO60220 97 aaPredicted RBP6.84□□□□□ -1.31
SSBP3-211ENST00000528787 GMDSO60547 372 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 DHRS3O75911 302 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 RPP14O95059 124 aaKnown RBP6.84□□□□□ -1.31
SSBP3-211ENST00000528787 IGHV3-13P01766 116 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 OCM2P0CE71 109 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 OCMP0CE72 109 aaPredicted RBP6.84□□□□□ -1.31
SSBP3-211ENST00000528787 LIMS3P0CW19 117 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 LIMS4P0CW20 117 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 KITLGP21583 273 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 ACHEP22303 614 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 GALP22466 123 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 C21orf33P30042 268 aaPredicted RBP6.84□□□□□ -1.31
SSBP3-211ENST00000528787 RPS27P42677 84 aaKnown RBP6.84□□□□□ -1.31
SSBP3-211ENST00000528787 OR12D2P58182 307 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 NKX6-1P78426 367 aaPredicted RBP6.84□□□□□ -1.31
SSBP3-211ENST00000528787 RIPPLY1Q0D2K3 151 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 NKPD1Q17RQ9 610 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 TP53I3Q53FA7 332 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF684Q5T5D7 378 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 FAM57BQ71RH2 274 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 SPATC1Q76KD6 591 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 CATSPERDQ86XM0 798 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 MUC15Q8N387 334 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 SEMA6DQ8NFY4 1073 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 OR10S1Q8NGN2 331 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 OR13G1Q8NGZ3 307 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 OR2G2Q8NGZ5 317 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 FGFBP3Q8TAT2 258 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 GPR148Q8TDV2 347 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 TMEM171Q8WVE6 324 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 HTRA1Q92743 480 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 HAVCR1Q96D42 359 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 SMIM19Q96E16 107 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 TRMT61AQ96FX7 289 aaKnown RBP6.84□□□□□ -1.31
SSBP3-211ENST00000528787 MS4A3Q96HJ5 214 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 SIGLEC11Q96RL6 698 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 MRPS26Q9BYN8 205 aaKnown RBP6.84□□□□□ -1.31
SSBP3-211ENST00000528787 RAB1BQ9H0U4 201 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 SLITRK2Q9H156 845 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 BARX1Q9HBU1 254 aaPredicted RBP6.84□□□□□ -1.31
SSBP3-211ENST00000528787 DYNLRB1Q9NP97 96 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 MYOZ1Q9NP98 299 aaPredicted RBP6.84□□□□□ -1.31
SSBP3-211ENST00000528787 ACOT13Q9NPJ3 140 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 CBLN4Q9NTU7 201 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 ACOXLQ9NUZ1 547 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 C14orf119Q9NWQ9 140 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 FAM206AQ9NX38 181 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 UBAP1Q9NZ09 502 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 SCOCQ9UIL1 159 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 ENPP5Q9UJA9 477 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF281Q9Y2X9 895 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 MPC1Q9Y5U8 109 aa6.84□□□□□ -1.31
SSBP3-211ENST00000528787 SPTAN1Q13813 2472 aaKnown RBP6.84□□□□□ -1.32
SSBP3-211ENST00000528787 FASNP49327 2511 aaKnown RBP6.83□□□□□ -1.32
SSBP3-211ENST00000528787 IGLV3-9A0A075B6K5 115 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF816-ZNF321PA0A0X1KG74 233 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 TRIM64A6NGJ6 449 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 IQCF6A8MYZ5 107 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 SHISA9B4DS77 424 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF879B4DU55 563 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 OGG1O15527 345 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 PLPP2O43688 288 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 ARL6IP5O75915 188 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 APOL3O95236 402 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 CLPTM1O96005 669 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 RAF1P04049 648 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 HLA-DPB1P04440 258 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 CELA3BP08861 270 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 DBHP09172 617 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 OR4A8P0C604 315 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 FAM157BP0CG42 384 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 ZNF20P17024 532 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 TNFRSF1AP19438 455 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 CCL1P22362 96 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 CALCRP30988 508 aa6.83□□□□□ -1.32
SSBP3-211ENST00000528787 PPOXP50336 477 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms