RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 PAQR6Q6TCH4 344 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 LIMS2Q7Z4I7 341 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 LYG2Q86SG7 212 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 BAGE3Q86Y29 109 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 BAGE2Q86Y30 109 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 CMTM4Q8IZR5 234 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 ACTR3CQ9C0K3 210 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-219ENST00000528621 RNF32Q9H0A6 362 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 SLCO1C1Q9NYB5 712 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 B9D1Q9UPM9 204 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 FLVCR1Q9Y5Y0 555 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 FITM1A5D6W6 292 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 SHISA7A6NL88 538 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 CXCL13O43927 109 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 OR13C7P0DN81 318 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 TMEM11P17152 192 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 EVX1P49640 407 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 AGFG1P52594 562 aaKnown RBP7.68□□□□□ -1.18
CTNND1-219ENST00000528621 RAB1AP62820 205 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 RPL11P62913 178 aaKnown RBP7.68□□□□□ -1.18
CTNND1-219ENST00000528621 AGERQ15109 404 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 TCTN3Q6NUS6 607 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 TRAT1Q6PIZ9 186 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 TSEN54Q7Z6J9 526 aaKnown RBP7.68□□□□□ -1.18
CTNND1-219ENST00000528621 HSD17B11Q8NBQ5 300 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 S1PR3Q99500 378 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 UFSP2Q9NUQ7 469 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 RGPD4Q7Z3J3 1758 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 A0A087WUJ7 227 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 SERPINE3A8MV23 424 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 FAM157BP0CG42 384 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 ZNF121P58317 390 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-219ENST00000528621 B4GALNT1Q00973 533 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 RNPS1Q15287 305 aaKnown RBP7.68□□□□□ -1.18
CTNND1-219ENST00000528621 BAK1Q16611 211 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 PXDC1Q5TGL8 231 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 ASTLQ6HA08 431 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-219ENST00000528621 ADGRF3Q8IZF5 1079 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 OR13C5Q8NGS8 318 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 SPACA9Q96E40 222 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-219ENST00000528621 PELI1Q96FA3 418 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 C2orf50Q96LR7 162 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 SOX7Q9BT81 388 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 CRLF2Q9HC73 371 aa7.68□□□□□ -1.18
CTNND1-219ENST00000528621 EXOGQ9Y2C4 368 aaKnown RBP7.68□□□□□ -1.18
CTNND1-219ENST00000528621 XRCC3O43542 346 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 NME1P15531 152 aaKnown RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 UBE2IP63279 158 aaKnown RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 RAB35Q15286 201 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 PCK2Q16822 640 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 HLA-BQ31612 363 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 KCNRGQ8N5I3 272 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 ANKRD53Q8N9V6 530 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 APH1BQ8WW43 257 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 APOBEC3DQ96AK3 386 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 TMEM30AQ9NV96 361 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 CRYAAP02489 173 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 H2AFB1P0C5Y9 115 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 OR10A3P58181 314 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 ERHP84090 104 aaKnown RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 FABP5Q01469 135 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 FLI1Q01543 452 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 HYAL1Q12794 435 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 C1orf53Q5VUE5 145 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 RGS7BPQ6MZT1 257 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 FAM122CQ6P4D5 195 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 OSR2Q8N2R0 312 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 FBXL6Q8N531 539 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 CHRDL1Q9BU40 450 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 ZNF385DQ9H6B1 395 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 ISG20L2Q9H9L3 353 aaKnown RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 TNFRSF12AQ9NP84 129 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 FCMRO60667 390 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 MDH2P40926 338 aaKnown RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 GABRA4P48169 554 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 C21orf58P58505 322 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 RAE1P78406 368 aaKnown RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 SMIM21Q3B7S5 101 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 ZNF468Q5VIY5 522 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 ABI3BPQ7Z7G0 1075 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 ZNF439Q8NDP4 499 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 COL24A1Q17RW2 1714 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 DHHO43323 396 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 PEX11BO96011 259 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 GABRG2P18507 467 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 GNB2P62879 340 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 CLPPQ16740 277 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 JMJD6Q6NYC1 403 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 TMEM179BQ7Z7N9 219 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 PP6455Q8WZ26 134 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 CHST6Q9GZX3 395 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 RYDENQ9NUL5 291 aaKnown RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 MED29Q9NX70 200 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 WSB2Q9NYS7 404 aaPredicted RBP7.67□□□□□ -1.18
CTNND1-219ENST00000528621 WNT16Q9UBV4 365 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 SLC23A1Q9UHI7 598 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 PSMB6P28072 239 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 NDUFA6P56556 154 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 TMPRSS11FQ6ZWK6 438 aa7.67□□□□□ -1.18
CTNND1-219ENST00000528621 SFT2D1Q8WV19 159 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms