RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 DAPP51397 102 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 PRKXP51817 358 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 SNAI3Q3KNW1 292 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 TMEM155Q4W5P6 130 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 ASRGL1Q7L266 308 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 LRRC28Q86X40 367 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR6N2Q8NGY6 317 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 SPRYD4Q8WW59 207 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 ERGIC1Q969X5 290 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 SPSB4Q96A44 273 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 MEGF10Q96KG7 1140 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 GAL3ST1Q99999 423 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 HIF1ANQ9NWT6 349 aa10.22□□□□□ -0.77
TRAPPC4-209ENST00000528230 CD300LBA8K4G0 201 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 H0YL77 283 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 TMEM178BH3BS89 294 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 PLPP2O43688 288 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 GMDSO60547 372 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 CIB2O75838 187 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 SBK2P0C263 348 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 SLC2A5P22732 501 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 HSD11B1P28845 292 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 DDOSTP39656 456 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 GATA4P43694 442 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZNF92Q03936 586 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 PTGES3Q15185 160 aaKnown RBP10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 SNAPC1Q16533 368 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 KLHL12Q53G59 568 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 GLYATL3Q5SZD4 288 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 TMEM236Q5W0B7 351 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 CXXC5Q7LFL8 322 aaKnown RBP10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZDHHC13Q8IUH4 622 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 SPICQ8N5J4 248 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 BHLHE23Q8NDY6 225 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR10AD1Q8NGE0 317 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 OR52H1Q8NGJ2 320 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 OTOSQ8NHW6 89 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 ZMYND19Q96E35 227 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 SIGLEC11Q96RL6 698 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 PRRG3Q9BZD7 231 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 GABARAPL1Q9H0R8 117 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 KRT84Q9NSB2 600 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 TVP23BQ9NYZ1 205 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 ENOPH1Q9UHY7 261 aa10.21□□□□□ -0.77
TRAPPC4-209ENST00000528230 DOCK11Q5JSL3 2073 aa10.21□□□□□ -0.78
TRAPPC4-209ENST00000528230 ISPDA4D126 451 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 GGT3PA6NGU5 568 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 LRRC30A6NM36 301 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 F5H5P2 479 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 LYNP07948 512 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 CFL1P23528 166 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 GATA3P23771 443 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 MDH2P40926 338 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 OPRL1P41146 370 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 CD200P41217 278 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 CX3CR1P49238 355 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 MMP16P51512 607 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 RAD23AP54725 363 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 BTG1P62324 171 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 MAB21L1Q13394 359 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 KDM4DQ6B0I6 523 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 IL17RELQ6ZVW7 336 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 PRSS45Q7RTY3 260 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 KLBQ86Z14 1044 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 C1orf87Q8N0U7 546 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 MUC20Q8N307 709 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 KLHL36Q8N4N3 616 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 TEX29Q8N6K0 151 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 SPERTQ8NA61 448 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 PLPP7Q8NBV4 271 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 CENPNQ96H22 339 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 TEAD3Q99594 435 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 OSBPL10Q9BXB5 764 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 NIPAL2Q9H841 368 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 PATZ1Q9HBE1 687 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 LPAR2Q9HBW0 351 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 G6PC2Q9NQR9 355 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 DCAF16Q9NXF7 216 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 MRPL15Q9P015 296 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 PCDHB10Q9UN67 800 aa10.2□□□□□ -0.78
TRAPPC4-209ENST00000528230 ANK3Q12955 4377 aaKnown RBP10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 PPIAL4EA0A075B759 164 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 PPIAL4CA0A0B4J2A2 164 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 C5orf63A6NC05 138 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 PPIAL4DF5H284 164 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 J3QLI3 93 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 SELENOFO60613 162 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 FOXH1O75593 365 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 PTBP3O95758 552 aaKnown RBP10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 HLA-DPB1P04440 258 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 ANXA2P07355 339 aaKnown RBP10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 H2BFMP0C1H6 154 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 PPIAL4FP0DN26 164 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 SLC2A1P11166 492 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 ALOX5APP20292 161 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 PRSS12P56730 875 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 RPS7P62081 194 aaKnown RBP10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 EFNB1P98172 346 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 MZT1Q08AG7 82 aa10.19□□□□□ -0.78
TRAPPC4-209ENST00000528230 APOFQ13790 326 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms