RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 POU1F1P28069 291 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 THBS2P35442 1172 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 POLR2IP36954 125 aaKnown RBP8.94□□□□□ -0.98
CD44-227ENST00000528086 OPRL1P41146 370 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 HCCSP53701 268 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 TPTEP56180 551 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 ATP6AP1Q15904 470 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 SLC27A4Q6P1M0 643 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 BCDIN3DQ7Z5W3 292 aaKnown RBP8.94□□□□□ -0.98
CD44-227ENST00000528086 AMIGO2Q86SJ2 522 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 WDR86Q86TI4 376 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 OR5L1Q8NGL2 311 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 OR13G1Q8NGZ3 307 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 SGK3Q96BR1 496 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 COG8Q96MW5 612 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 ZNF582Q96NG8 517 aaPredicted RBP8.94□□□□□ -0.98
CD44-227ENST00000528086 KCNJ15Q99712 375 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 EGLN1Q9GZT9 426 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 FGF23Q9GZV9 251 aaPredicted RBP8.94□□□□□ -0.98
CD44-227ENST00000528086 OR51V1Q9H2C8 321 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 TMEM165Q9HC07 324 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 CENPMQ9NSP4 180 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 PPP1R3CQ9UQK1 317 aa8.94□□□□□ -0.98
CD44-227ENST00000528086 LOC105371242A0A075B767 164 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 TRAV20A0A0B4J274 112 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 TNFRSF13BO14836 293 aaPredicted RBP8.93□□□□□ -0.98
CD44-227ENST00000528086 PRKYO43930 277 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 IFNGP01579 166 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 ANXA8P13928 327 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 ADRA2CP18825 462 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 CA6P23280 308 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 GSTT1P30711 240 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 GATA4P43694 442 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 SLC6A9P48067 706 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 CRISP1P54107 249 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 BTG1P62324 171 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 LCN2P80188 198 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 EIF2B1Q14232 305 aaKnown RBP8.93□□□□□ -0.98
CD44-227ENST00000528086 ZMAT1Q5H9K5 638 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 PRAMEF6Q5VXH4 476 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 KDM4DQ6B0I6 523 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 DRAM2Q6UX65 266 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 MOGAT3Q86VF5 341 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 GLCCI1Q86VQ1 547 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 ERI1Q8IV48 349 aaKnown RBP8.93□□□□□ -0.98
CD44-227ENST00000528086 C11orf53Q8IXP5 236 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 RFLNBQ8N5W9 214 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 ATG16L2Q8NAA4 619 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 C19orf18Q8NEA5 215 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 DEFB108BQ8NET1 73 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 OR56B2PQ8NGI1 322 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 OR6N2Q8NGY6 317 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 OR51F2Q8NH61 342 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 RAB1CQ92928 201 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 NRBF2Q96F24 287 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 LYZL4Q96KX0 146 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 INTS14Q96SY0 518 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 PATZ1Q9HBE1 687 aaKnown RBP8.93□□□□□ -0.98
CD44-227ENST00000528086 TMEM100Q9NV29 134 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 UBAP1Q9NZ09 502 aa8.93□□□□□ -0.98
CD44-227ENST00000528086 POLR3KQ9Y2Y1 108 aaPredicted RBP8.93□□□□□ -0.98
CD44-227ENST00000528086 CEACAM18A8MTB9 384 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 ZNF878C9JN71 531 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 E9PQ18 207 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 GNGT2O14610 69 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 FAM20BO75063 409 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 E2F6O75461 281 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 VENTXO95231 258 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 WNT2P09544 360 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 ALOX5APP20292 161 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 ACKR3P25106 362 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 CD200P41217 278 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 NAA10P41227 235 aaPredicted RBP8.92□□□□□ -0.98
CD44-227ENST00000528086 ZNF121P58317 390 aaPredicted RBP8.92□□□□□ -0.98
CD44-227ENST00000528086 ELF3P78545 371 aaPredicted RBP8.92□□□□□ -0.98
CD44-227ENST00000528086 FAM3AP98173 230 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 PTGES3Q15185 160 aaKnown RBP8.92□□□□□ -0.98
CD44-227ENST00000528086 TMEM155Q4W5P6 130 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 LYPD2Q6UXB3 125 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 PGAP1Q75T13 922 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 PARP8Q8N3A8 854 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 OR5K1Q8NHB7 308 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 OTOSQ8NHW6 89 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 Q8TCH9 128 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 LRTOMTQ8WZ04 291 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 GAL3ST1Q99999 423 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 TMEM246Q9BRR3 403 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 COPS4Q9BT78 406 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 GABARAPL1Q9H0R8 117 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 COPS3Q9UNS2 423 aa8.92□□□□□ -0.98
CD44-227ENST00000528086 hCG_38984A0A1B0GV85 526 aa8.91□□□□□ -0.98
CD44-227ENST00000528086 ISPDA4D126 451 aa8.91□□□□□ -0.98
CD44-227ENST00000528086 ZAR1LA6NP61 321 aa8.91□□□□□ -0.98
CD44-227ENST00000528086 RNF212BA8MTL3 300 aa8.91□□□□□ -0.98
CD44-227ENST00000528086 A8MXK9 166 aa8.91□□□□□ -0.98
CD44-227ENST00000528086 PRR23D1E9PI22 279 aaPredicted RBP8.91□□□□□ -0.98
CD44-227ENST00000528086 H3BNX3 289 aa8.91□□□□□ -0.98
CD44-227ENST00000528086 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.91□□□□□ -0.98
CD44-227ENST00000528086 HAX1O00165 279 aa8.91□□□□□ -0.98
CD44-227ENST00000528086 PNPP00491 289 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms