RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 A0A0X1KG70 313 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 C5orf63A6NC05 138 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 CYB5R3P00387 301 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-213ENST00000527897 ANXA2P07355 339 aaKnown RBP13.09□□□□□ -0.31
CAPN1-213ENST00000527897 ANOS1P23352 680 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 HSD11B1P28845 292 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 ZNF92Q03936 586 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 ZMYND11Q15326 602 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 OR8G1Q15617 311 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 GLYATL3Q5SZD4 288 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 LINC01590Q5TEZ4 76 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 TMEM236Q5W0B7 351 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 DRAM2Q6UX65 266 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 DPY19L4Q7Z388 723 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 PHC2Q8IXK0 858 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 SPICQ8N5J4 248 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 OR4M2Q8NGB6 313 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 KCNJ15Q99712 375 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 BRD7Q9NPI1 651 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 DNAJC27Q9NZQ0 273 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 METRNQ9UJH8 293 aa13.09□□□□□ -0.31
CAPN1-213ENST00000527897 LOC105371242A0A075B767 164 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 CD300LBA8K4G0 201 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 TMEM178BH3BS89 294 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 RGS9O75916 674 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-213ENST00000527897 GLCEO94923 617 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 CA6P23280 308 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 SLC15A1P46059 708 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 CX3CR1P49238 355 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 RASSF2P50749 326 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 RPS7P62081 194 aaKnown RBP13.08□□□□□ -0.32
CAPN1-213ENST00000527897 GFOD2Q3B7J2 385 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 TEX30Q5JUR7 227 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 PAPD5Q8NDF8 572 aaKnown RBP13.08□□□□□ -0.32
CAPN1-213ENST00000527897 DVL3Q92997 716 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-213ENST00000527897 SIGLEC11Q96RL6 698 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 ABHD6Q9BV23 337 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 TEX12Q9BXU0 123 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 G6PC2Q9NQR9 355 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 UFSP2Q9NUQ7 469 aa13.08□□□□□ -0.32
CAPN1-213ENST00000527897 TCF21O43680 179 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 SELENOFO60613 162 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 HMGN1P05114 100 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 IRF2P14316 349 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 ADRA2CP18825 462 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 OTX1P32242 354 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-213ENST00000527897 NAA10P41227 235 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-213ENST00000527897 GRB2P62993 217 aaKnown RBP13.07□□□□□ -0.32
CAPN1-213ENST00000527897 PCK2Q16822 640 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 KRTAP24-1Q3LI83 254 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 C1orf146Q5VVC0 180 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 PRAMEF6Q5VXH4 476 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 SHFQ7M4L6 423 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 LRRC28Q86X40 367 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-213ENST00000527897 CPOQ8IVL8 374 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 THEM6Q8WUY1 208 aa13.07□□□□□ -0.32
CAPN1-213ENST00000527897 ADAT1Q9BUB4 502 aaKnown RBP13.07□□□□□ -0.32
CAPN1-213ENST00000527897 PATZ1Q9HBE1 687 aaKnown RBP13.07□□□□□ -0.32
CAPN1-213ENST00000527897 PAPOLBQ9NRJ5 636 aaKnown RBP13.07□□□□□ -0.32
CAPN1-213ENST00000527897 LRRC30A6NM36 301 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 IFNL4K9M1U5 179 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 FOXH1O75593 365 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 AVPP01185 164 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 H2BFMP0C1H6 154 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 ZFP36P26651 326 aaKnown RBP13.06□□□□□ -0.32
CAPN1-213ENST00000527897 THBS2P35442 1172 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 MDH2P40926 338 aaKnown RBP13.06□□□□□ -0.32
CAPN1-213ENST00000527897 SEC61A1P61619 476 aaKnown RBP13.06□□□□□ -0.32
CAPN1-213ENST00000527897 CDK5Q00535 292 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 SNAPC1Q16533 368 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 TIGD6Q17RP2 521 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 TMEM155Q4W5P6 130 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 FAM201AQ5SY85 155 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 LIPNQ5VXI9 398 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 FAM57BQ71RH2 274 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 C1orf87Q8N0U7 546 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 MUC20Q8N307 709 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-213ENST00000527897 RFLNBQ8N5W9 214 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 BOLLQ8N9W6 283 aaKnown RBP13.06□□□□□ -0.32
CAPN1-213ENST00000527897 BBS1Q8NFJ9 593 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 OR56B2PQ8NGI1 322 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 SPATA3Q8NHX4 192 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 AMELYQ99218 206 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 REPIN1Q9BWE0 567 aaKnown RBP13.06□□□□□ -0.32
CAPN1-213ENST00000527897 TMPRSS13Q9BYE2 586 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 NTN4Q9HB63 628 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 TVP23BQ9NYZ1 205 aa13.06□□□□□ -0.32
CAPN1-213ENST00000527897 CEACAM18A8MTB9 384 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 XRCC2O43543 280 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 ATP5HO75947 161 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 LYNP07948 512 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 RPS2P15880 293 aaKnown RBP13.05□□□□□ -0.32
CAPN1-213ENST00000527897 PMELP40967 661 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 DAPP51397 102 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 ZNF121P58317 390 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-213ENST00000527897 MAB21L1Q13394 359 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 MPPED2Q15777 294 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 ESCO2Q56NI9 601 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 C1orf229Q6ZS94 237 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-213ENST00000527897 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms