RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 CCDC182A6NF36 153 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 EFCAB10A6NFE3 127 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 LRRC3CA6NJW4 275 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 C12orf71A8MTZ7 269 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 A8MVM7 634 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 CENPBD1B2RD01 187 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 FTCDNL1E5RQL4 147 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 RNF13O43567 381 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 PFDN1O60925 122 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 CTAG2O75638 210 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 TRAPPC6AO75865 159 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 NEURL1O76050 574 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 PTHP01270 115 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 IFNGP01579 166 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 HIST1H2ABP04908 130 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 HEXAP06865 529 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 YES1P07947 543 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 CHRM2P08172 466 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 ADH4P08319 380 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 CD14P08571 375 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 MRPL3P09001 348 aaKnown RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 RFPL3SP0C7P2 107 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 ADORA3P0DMS8 318 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 CALCBP10092 127 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 APEHP13798 732 aaKnown RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 KLK2P20151 261 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 SLC2A5P22732 501 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 NR4A1P22736 598 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 PSMB9P28065 219 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 GTF2E2P29084 291 aaKnown RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 PYCR1P32322 319 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 CD79BP40259 229 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 APOBEC1P41238 236 aaKnown RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 CDKN1BP46527 198 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 FHITP49789 147 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 ENTPD1P49961 510 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 ZNF84P51523 738 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 CCL11P51671 97 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 CDH11P55287 796 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 SNU13P55769 128 aaKnown RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 DLX5P56178 289 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 OR2B6P58173 313 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 EMX1Q04741 257 aaPredicted RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 GLO1Q04760 184 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 ITGADQ13349 1161 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 CRMP1Q14194 572 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 MELKQ14680 651 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 OR1C1Q15619 314 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 DEFB109BQ30KR1 87 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 TMEM176BQ3YBM2 270 aaPredicted RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 GLYR1Q49A26 553 aaPredicted RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 ALG10Q5BKT4 473 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 RNASE12Q5GAN4 147 aaKnown RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 SLC25A53Q5H9E4 307 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 SERTAD4-AS1Q5TG53 156 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 GPR107Q5VW38 600 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 RAET1LQ5VY80 246 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 MEDAGQ5VYS4 303 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 TIGD3Q6B0B8 471 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 SIGIRRQ6IA17 410 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 SPINK14Q6IE38 97 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 NIPAL3Q6P499 406 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 B3GLCTQ6Y288 498 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 DPY19L2P2Q6ZN68 376 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 MOB3CQ70IA8 216 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 KCTD9Q7L273 389 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 HIST3H2AQ7L7L0 130 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 PRSS45Q7RTY3 260 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 PRSS48Q7RTY5 328 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 DCXRQ7Z4W1 244 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 YRDCQ86U90 279 aaKnown RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 CLVS1Q8IUQ0 354 aaPredicted RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 WDFY1Q8IWB7 410 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 DND1Q8IYX4 353 aaKnown RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 TMEM99Q8N816 258 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 MINDY2Q8NBR6 621 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 CLEC1AQ8NC01 280 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 SLC37A3Q8NCC5 494 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 OR4F15Q8NGB8 312 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 OR51L1Q8NGJ5 315 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 OR51G2Q8NGK0 314 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 OR13F1Q8NGS4 319 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 OR5J2Q8NH18 312 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 ANGPTL6Q8NI99 470 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 SMAP2Q8WU79 429 aaPredicted RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 MITD1Q8WV92 249 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 LIPHQ8WWY8 451 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 RORBQ92753 470 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 HIST1H2ACQ93077 130 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 MYDGFQ969H8 173 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 NTNG2Q96CW9 530 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 DDIT4LQ96D03 193 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 NXPE2Q96DL1 559 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 Q96MT0 163 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 TSPAN32Q96QS1 320 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 OR5B2Q96R09 309 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 TBX5Q99593 518 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 UTP23Q9BRU9 249 aaKnown RBP3.68□□□□□ -1.82
CD44-226ENST00000527889 PRRG3Q9BZD7 231 aa3.68□□□□□ -1.82
CD44-226ENST00000527889 RBM38Q9H0Z9 239 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms