RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 OR8G1Q15617 311 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 C8orf82Q6P1X6 216 aaPredicted RBP19.51■□□□□ 0.71
CPSF1-202ENST00000527827 HDXQ7Z353 690 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 RP9Q8TA86 221 aaKnown RBP19.51■□□□□ 0.71
CPSF1-202ENST00000527827 SPRYD4Q8WW59 207 aaPredicted RBP19.51■□□□□ 0.71
CPSF1-202ENST00000527827 GATAD2BQ8WXI9 593 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 DYRK2Q92630 601 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 RBM4BQ9BQ04 359 aaKnown RBP19.51■□□□□ 0.71
CPSF1-202ENST00000527827 FUZQ9BT04 418 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 SIRPDQ9H106 197 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 FN3KRPQ9HA64 309 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 ACOXLQ9NUZ1 547 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 CYB5R1Q9UHQ9 305 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 RNF114Q9Y508 228 aa19.51■□□□□ 0.71
CPSF1-202ENST00000527827 C3orf80F5H4A9 247 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 ADAM20O43506 726 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 NCK1P16333 377 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 RHCEP18577 417 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 GGT2P36268 569 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 PDCD1Q15116 288 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 KCNJ8Q15842 424 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 ZBTB46Q86UZ6 589 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 BOLLQ8N9W6 283 aaKnown RBP19.5■□□□□ 0.71
CPSF1-202ENST00000527827 LINC01006Q8NI28 216 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 FAM162AQ96A26 154 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 RASSF4Q9H2L5 321 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 VIPAS39Q9H9C1 493 aa19.5■□□□□ 0.71
CPSF1-202ENST00000527827 FAM32AQ9Y421 112 aaKnown RBP19.5■□□□□ 0.71
CPSF1-202ENST00000527827 IGHV1-69DA0A0B4J2H0 117 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 CD300LBA8K4G0 201 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 GPR137BO60478 399 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 DIRAS1O95057 198 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 IGHV1-69P01742 117 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 HIST1H1CP16403 213 aaKnown RBP19.49■□□□□ 0.71
CPSF1-202ENST00000527827 ANOS1P23352 680 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 SLC36A3Q495N2 470 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 METTL11BQ5VVY1 283 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 MRPL21Q7Z2W9 205 aaKnown RBP19.49■□□□□ 0.71
CPSF1-202ENST00000527827 OR4K13Q8NH42 304 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 TBC1D15Q8TC07 691 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 FANK1Q8TC84 345 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 C7orf34Q96L11 122 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 DHRS1Q96LJ7 313 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 HOPXQ9BPY8 73 aaPredicted RBP19.49■□□□□ 0.71
CPSF1-202ENST00000527827 ADAT1Q9BUB4 502 aaKnown RBP19.49■□□□□ 0.71
CPSF1-202ENST00000527827 TRIM15Q9C019 465 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 SLC22A4Q9H015 551 aa19.49■□□□□ 0.71
CPSF1-202ENST00000527827 RPRD1BQ9NQG5 326 aaKnown RBP19.49■□□□□ 0.71
CPSF1-202ENST00000527827 ARPC3O15145 178 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 CLPXO76031 633 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 RENP00797 406 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 IGHV4-59P01825 116 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 COX4I1P13073 169 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 PROK1P58294 105 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 OR8B8Q15620 311 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 RFX4Q33E94 735 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 PNLDC1Q8NA58 520 aaKnown RBP19.48■□□□□ 0.71
CPSF1-202ENST00000527827 OR2AJ1Q8NGZ0 328 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 OR52J3Q8NH60 311 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 LHX4Q969G2 390 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 MAP6Q96JE9 813 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 OR52D1Q9H346 318 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 FN3KQ9H479 309 aa19.48■□□□□ 0.71
CPSF1-202ENST00000527827 KRCC1Q9NPI7 259 aaPredicted RBP19.48■□□□□ 0.71
CPSF1-202ENST00000527827 MRPL22Q9NWU5 206 aaKnown RBP19.48■□□□□ 0.71
CPSF1-202ENST00000527827 NOP16Q9Y3C1 178 aaKnown RBP19.48■□□□□ 0.71
CPSF1-202ENST00000527827 A0A0U1RQK1 487 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 C5orf63A6NC05 138 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 OOEPA6NGQ2 149 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 M0R135 149 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 GMDSO60547 372 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 IER3P46695 156 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 TPTEP56180 551 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 ZNF92Q03936 586 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 SNAI3Q3KNW1 292 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 LDLRAD3Q86YD5 345 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 FAM86B1Q8N7N1 296 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 PLPP7Q8NBV4 271 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 ZNF799Q96GE5 643 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 PKP2Q99959 881 aa19.47■□□□□ 0.71
CPSF1-202ENST00000527827 TRAV38-1A0A0B4J264 116 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 OR6C68A6NDL8 312 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 NDUFA2O43678 99 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 GYPAP02724 150 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 SLC6A6P31641 620 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 ARF6P62330 175 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 TAF9Q16594 264 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 ZNF826PQ6ZT77 177 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 FAM90A1Q86YD7 464 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 GCSAMQ8N6F7 178 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 OR2AE1Q8NHA4 323 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 KCTD14Q9BQ13 255 aaPredicted RBP19.46■□□□□ 0.71
CPSF1-202ENST00000527827 TRIM36Q9NQ86 728 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 C1orf123Q9NWV4 160 aa19.46■□□□□ 0.71
CPSF1-202ENST00000527827 BTN2A1Q7KYR7 527 aa19.45■□□□□ 0.7
CPSF1-202ENST00000527827 PIP4P2Q8N4L2 257 aa19.45■□□□□ 0.7
CPSF1-202ENST00000527827 UBE2FQ969M7 185 aa19.45■□□□□ 0.7
CPSF1-202ENST00000527827 IFT27Q9BW83 186 aa19.45■□□□□ 0.7
CPSF1-202ENST00000527827 GGT3PA6NGU5 568 aa19.44■□□□□ 0.7
CPSF1-202ENST00000527827 DVL1O14640 695 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms