RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 NBPF19A0A087WUL8 3843 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 TMEM269A0A1B0GVZ9 245 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 ACOD1A6NK06 481 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 B9A039 149 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 CDK1P06493 297 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 PAX1P15863 534 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 KITLGP21583 273 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 TUBG1P23258 451 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 PSMB10P40306 273 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 RGS6P49758 472 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 RIDAP52758 137 aaKnown RBP9.2□□□□□ -0.94
NEDD8-205ENST00000527046 FAM3AP98173 230 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 TAF13Q15543 124 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 ZNF718Q3SXZ3 478 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 RNLSQ5VYX0 342 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 C20orf204Q6ZNR8 217 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 AHSA2Q719I0 299 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 FAM57BQ71RH2 274 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 KRT74Q7RTS7 529 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 CATSPERDQ86XM0 798 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 EGFL6Q8IUX8 553 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 ELMOD2Q8IZ81 293 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 SYS1Q8N2H4 156 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 OR8B12Q8NGG6 310 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 SYNPRQ8TBG9 265 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 ALG8Q9BVK2 526 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 PPP1R3EQ9H7J1 279 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 BRD7Q9NPI1 651 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 TUBG2Q9NRH3 451 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 INPP5EQ9NRR6 644 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 ACOXLQ9NUZ1 547 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 ZNF701Q9NV72 531 aaPredicted RBP9.2□□□□□ -0.94
NEDD8-205ENST00000527046 FRRS1LQ9P0K9 344 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 PURGQ9UJV8 347 aaKnown RBP9.2□□□□□ -0.94
NEDD8-205ENST00000527046 IKZF2Q9UKS7 526 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 PLEKHA6Q9Y2H5 1048 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 LSM2Q9Y333 95 aaKnown RBP9.2□□□□□ -0.94
NEDD8-205ENST00000527046 CMAHPQ9Y471 501 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 SPEF1Q9Y4P9 236 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 R4GMQ9 66 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 USF3Q68DE3 2245 aa9.2□□□□□ -0.94
NEDD8-205ENST00000527046 POLQO75417 2590 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 EFCAB10A6NFE3 127 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 PTGES3LE9PB15 166 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 RPP14O95059 124 aaKnown RBP9.19□□□□□ -0.94
NEDD8-205ENST00000527046 RAC2P15153 192 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 ACKR3P25106 362 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 SLC6A9P48067 706 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 GTF2A1P52655 376 aaPredicted RBP9.19□□□□□ -0.94
NEDD8-205ENST00000527046 CSNK2BP67870 215 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 ACTC1P68032 377 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 ACTA1P68133 377 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 WDR38Q5JTN6 314 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 AGAP6Q5VW22 663 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 OR2T2Q6IF00 324 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.19□□□□□ -0.94
NEDD8-205ENST00000527046 KRTAP1-3Q8IUG1 177 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 C1orf174Q8IYL3 243 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 FBXL14Q8N1E6 418 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 NANOGP1Q8N7R0 232 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 PLPP7Q8NBV4 271 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 SPRYD4Q8WW59 207 aaPredicted RBP9.19□□□□□ -0.94
NEDD8-205ENST00000527046 MBD6Q96DN6 1003 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 C4orf36Q96KX1 117 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 CDCA4Q9BXL8 241 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 PBOV1Q9GZY1 135 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 NUFIP1Q9UHK0 495 aaKnown RBP9.19□□□□□ -0.94
NEDD8-205ENST00000527046 DUSP13Q9UII6 198 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 N6AMT1Q9Y5N5 214 aa9.19□□□□□ -0.94
NEDD8-205ENST00000527046 A0A0U1RQV5 110 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 hCG_38984A0A1B0GV85 526 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 ZSCAN5BA6NJL1 495 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 OR4C45A6NMZ5 311 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 IQCF6A8MYZ5 107 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 H3BSA7 217 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 J3QLW9 94 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 OGG1O15527 345 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 RAF1P04049 648 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 KRT8P05787 483 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 ANXA2P07355 339 aaKnown RBP9.18□□□□□ -0.94
NEDD8-205ENST00000527046 ZNF19P17023 458 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 HSD11B1P28845 292 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 RBMXP38159 391 aaKnown RBP9.18□□□□□ -0.94
NEDD8-205ENST00000527046 CDKN1AP38936 164 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 ALDH3B1P43353 468 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 HNRNPA0Q13151 305 aaKnown RBP9.18□□□□□ -0.94
NEDD8-205ENST00000527046 ARL9Q6T311 187 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 KCTD20Q7Z5Y7 419 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 RDH10Q8IZV5 341 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 YIPF7Q8N8F6 280 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 ZNF540Q8NDQ6 660 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 OR5L1Q8NGL2 311 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 OR2G2Q8NGZ5 317 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 SNX33Q8WV41 574 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 TAAR3PQ9P1P4 343 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 GNG8Q9UK08 70 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 OR52A1Q9UKL2 312 aa9.18□□□□□ -0.94
NEDD8-205ENST00000527046 CAB39Q9Y376 341 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-205ENST00000527046 EXOSC1Q9Y3B2 195 aaKnown RBP9.18□□□□□ -0.94
NEDD8-205ENST00000527046 CSMD2Q7Z408 3487 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms