RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 MPIG6BO95866 241 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 KNG1P01042 644 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 AWAT2Q6E213 333 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 ARMC6Q6NXE6 501 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 TMPRSS9Q7Z410 1059 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 OR52N5Q8NH56 324 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 PTPMT1Q8WUK0 201 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-202ENST00000524773 TMEM230Q96A57 120 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 TMEM41AQ96HV5 264 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 NIT2Q9NQR4 276 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 RPH3AQ9Y2J0 694 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-202ENST00000524773 COLCA2A8K830 154 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 PRAMEF26H0Y7S4 382 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 RAD51DO75771 328 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 GUSBP08236 651 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 MELTFP08582 738 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 CPT2P23786 658 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 EFNA3P52797 238 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 DCDP81605 110 aaKnown RBP11.73□□□□□ -0.53
CAPN1-202ENST00000524773 LCN10Q6JVE6 187 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 UQCC3Q6UW78 93 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 CLEC18BQ6UXF7 455 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 DEFB119Q8N690 84 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 EDAQ92838 391 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 NKX2-4Q9H2Z4 354 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 RCC2Q9P258 522 aaKnown RBP11.73□□□□□ -0.53
CAPN1-202ENST00000524773 PCOLCE2Q9UKZ9 415 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 IL2RAP01589 272 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 APOC1P02654 83 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 SNRNP70P08621 437 aaKnown RBP11.72□□□□□ -0.53
CAPN1-202ENST00000524773 OR8U9P0C7N5 309 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 NTSR1P30989 418 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 FHITP49789 147 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 FUT7Q11130 342 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 KRBOX4Q5JUW0 171 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 KCTD18Q6PI47 426 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-202ENST00000524773 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 C19orf47Q8N9M1 422 aaKnown RBP11.72□□□□□ -0.53
CAPN1-202ENST00000524773 OR8U1Q8NH10 309 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 ARL5BQ96KC2 179 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 IP6K3Q96PC2 410 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 RPS10P5Q9NQ39 176 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 PCDH15Q96QU1 1955 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 TEX13DA0A0J9YY54 714 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-202ENST00000524773 hCG_1809904A0A1W2PP81 198 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 A0A1W2PR64 198 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 A0A1W2PRV1 198 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 METTL21EPA6NDL7 271 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 A6NLC8 198 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 RNASEK-C17orf49H0YIS7 233 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 GFERP55789 205 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 SCAND1P57086 179 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 PJVKQ0ZLH3 352 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 PLAC9Q5JTB6 97 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 LPCAT3Q6P1A2 487 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 DHRS11Q6UWP2 260 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 NAA40Q86UY6 237 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-202ENST00000524773 ARHGEF39Q8N4T4 335 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 NECAB3Q96P71 396 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-202ENST00000524773 SLC17A5Q9NRA2 495 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 SOHLH2Q9NX45 425 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 LPAR3Q9UBY5 353 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 RHBDD3Q9Y3P4 386 aa11.72□□□□□ -0.53
CAPN1-202ENST00000524773 LINC01565O15544 149 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 MBTPS2O43462 519 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 DUS4LO95620 317 aaKnown RBP11.71□□□□□ -0.53
CAPN1-202ENST00000524773 EMP2P54851 167 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 SLC37A1P57057 533 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 OR2B8PP59922 312 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 SLC30A7Q8NEW0 376 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 ZNF519Q8TB69 540 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 CHRDQ9H2X0 955 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 MMP26Q9NRE1 261 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 AMDHD2Q9Y303 409 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 R4GMQ9 66 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 DOCK8Q8NF50 2099 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 ATG2AQ2TAZ0 1938 aa11.71□□□□□ -0.53
CAPN1-202ENST00000524773 F8VVB4 439 aa11.71□□□□□ -0.54
CAPN1-202ENST00000524773 F8VWA3 439 aa11.71□□□□□ -0.54
CAPN1-202ENST00000524773 FABP1P07148 127 aa11.71□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF823P16415 610 aa11.71□□□□□ -0.54
CAPN1-202ENST00000524773 OR3A4PP47883 348 aa11.71□□□□□ -0.54
CAPN1-202ENST00000524773 CLDN6P56747 220 aa11.71□□□□□ -0.54
CAPN1-202ENST00000524773 SRSF4Q08170 494 aaKnown RBP11.71□□□□□ -0.54
CAPN1-202ENST00000524773 MEF2DQ14814 521 aa11.71□□□□□ -0.54
CAPN1-202ENST00000524773 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.71□□□□□ -0.54
CAPN1-202ENST00000524773 OR51E1Q8TCB6 317 aa11.71□□□□□ -0.54
CAPN1-202ENST00000524773 SLC25A43Q8WUT9 341 aaPredicted RBP11.71□□□□□ -0.54
CAPN1-202ENST00000524773 MRGPRX1Q96LB2 322 aa11.71□□□□□ -0.54
CAPN1-202ENST00000524773 CARHSP1Q9Y2V2 147 aaKnown RBP11.71□□□□□ -0.54
CAPN1-202ENST00000524773 IGHV3-20A0A0C4DH32 117 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 EPOPA6NHQ4 379 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 C1QL1O75973 258 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 ARG1P05089 322 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 H2BFMP0C1H6 154 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF44P15621 663 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 SUPT4H1P63272 117 aaKnown RBP11.7□□□□□ -0.54
CAPN1-202ENST00000524773 EMC4Q5J8M3 183 aa11.7□□□□□ -0.54
CAPN1-202ENST00000524773 TTLL10Q6ZVT0 673 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms