RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 GGT2P36268 569 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 RPL15P61313 204 aaKnown RBP21.42■■□□□ 1.02
PVT1-219ENST00000523427 TRAP1Q12931 704 aaKnown RBP21.42■■□□□ 1.02
PVT1-219ENST00000523427 PGM2L1Q6PCE3 622 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 DPY19L2P2Q6ZN68 376 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 Q6ZSV7 163 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 ZNF826PQ6ZT77 177 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 BTN2A1Q7KYR7 527 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 LNX2Q8N448 690 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 OR2AJ1Q8NGZ0 328 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 GPX7Q96SL4 187 aaPredicted RBP21.42■■□□□ 1.02
PVT1-219ENST00000523427 ATF6BQ99941 703 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 SEMA6AQ9H2E6 1030 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 SAR1AQ9NR31 198 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 C1orf123Q9NWV4 160 aa21.42■■□□□ 1.02
PVT1-219ENST00000523427 IGHV3OR15-7A0A075B7D8 119 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 IGLV1-36A0A0B4J1U3 117 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 TRAV38-1A0A0B4J264 116 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 OOEPA6NGQ2 149 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 UNC119BA6NIH7 251 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 A6NLC8 198 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 CD300LBA8K4G0 201 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 HLA-DQA2P01906 255 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 H1F0P07305 194 aaKnown RBP21.41■■□□□ 1.02
PVT1-219ENST00000523427 FXYD6P3P58550 94 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 PRB3Q04118 309 aaPredicted RBP21.41■■□□□ 1.02
PVT1-219ENST00000523427 LIPEQ05469 1076 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 SLC18B1Q6NT16 456 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 CBLL1Q75N03 491 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 OR6V1Q8N148 313 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 ST8SIA4Q92187 359 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 RCN3Q96D15 328 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 NMNAT3Q96T66 252 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 NSRP1Q9H0G5 558 aaKnown RBP21.41■■□□□ 1.02
PVT1-219ENST00000523427 ENPP4Q9Y6X5 453 aa21.41■■□□□ 1.02
PVT1-219ENST00000523427 hCG_1807616A0A1W2PRN6 198 aa21.4■■□□□ 1.02
PVT1-219ENST00000523427 GGT3PA6NGU5 568 aa21.4■■□□□ 1.02
PVT1-219ENST00000523427 DVL1O14640 695 aa21.4■■□□□ 1.02
PVT1-219ENST00000523427 TSEN54Q7Z6J9 526 aaKnown RBP21.4■■□□□ 1.02
PVT1-219ENST00000523427 FGFRL1Q8N441 504 aa21.4■■□□□ 1.02
PVT1-219ENST00000523427 PIP4P2Q8N4L2 257 aa21.4■■□□□ 1.02
PVT1-219ENST00000523427 SLC26A10Q8NG04 563 aa21.4■■□□□ 1.02
PVT1-219ENST00000523427 OR4K13Q8NH42 304 aa21.4■■□□□ 1.02
PVT1-219ENST00000523427 DPAGT1Q9H3H5 408 aa21.4■■□□□ 1.02
PVT1-219ENST00000523427 FN3KQ9H479 309 aa21.4■■□□□ 1.02
PVT1-219ENST00000523427 DNAJB11Q9UBS4 358 aa21.4■■□□□ 1.02
PVT1-219ENST00000523427 A0A1W2PRD5 423 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 A0A1W2PRF3 423 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 A0A1W2PRM7 423 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 RENP00797 406 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 OMPP47874 163 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 TPTEP56180 551 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 ECH1Q13011 328 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 KRTAP27-1Q3LI81 207 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 DHRS7BQ6IAN0 325 aaPredicted RBP21.39■■□□□ 1.01
PVT1-219ENST00000523427 GDPGP1Q6ZNW5 385 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 SLC15A3Q8IY34 581 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 ZSCAN4Q8NAM6 433 aaPredicted RBP21.39■■□□□ 1.01
PVT1-219ENST00000523427 OR52J3Q8NH60 311 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 OR2AE1Q8NHA4 323 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 FAM162AQ96A26 154 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 ANKRD19PQ9H560 264 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 RPRD1BQ9NQG5 326 aaKnown RBP21.39■■□□□ 1.01
PVT1-219ENST00000523427 ONECUT1Q9UBC0 465 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 FAM32AQ9Y421 112 aaKnown RBP21.39■■□□□ 1.01
PVT1-219ENST00000523427 N6AMT1Q9Y5N5 214 aa21.39■■□□□ 1.01
PVT1-219ENST00000523427 TRBV4-1A0A0J9YWV2 114 aa21.38■■□□□ 1.01
PVT1-219ENST00000523427 HMGB1P1B2RPK0 211 aaPredicted RBP21.38■■□□□ 1.01
PVT1-219ENST00000523427 FCN3O75636 299 aa21.38■■□□□ 1.01
PVT1-219ENST00000523427 TXNDC12O95881 172 aa21.38■■□□□ 1.01
PVT1-219ENST00000523427 NCK1P16333 377 aa21.38■■□□□ 1.01
PVT1-219ENST00000523427 SEC23BQ15437 767 aa21.38■■□□□ 1.01
PVT1-219ENST00000523427 SMARCD3Q6STE5 483 aa21.38■■□□□ 1.01
PVT1-219ENST00000523427 VMO1Q7Z5L0 202 aa21.38■■□□□ 1.01
PVT1-219ENST00000523427 LDLRAD3Q86YD5 345 aa21.38■■□□□ 1.01
PVT1-219ENST00000523427 FAM90A1Q86YD7 464 aa21.38■■□□□ 1.01
PVT1-219ENST00000523427 CNTD2Q9H8S5 307 aa21.38■■□□□ 1.01
PVT1-219ENST00000523427 NOP16Q9Y3C1 178 aaKnown RBP21.38■■□□□ 1.01
PVT1-219ENST00000523427 ZNF816-ZNF321PA0A0X1KG74 233 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 NDUFA2O43678 99 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 DIRAS1O95057 198 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 CSF1P09603 554 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 TROVE2P10155 538 aaKnown RBP eCLIP21.37■■□□□ 1.01
PVT1-219ENST00000523427 ZNF92Q03936 586 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 C2orf68Q2NKX9 166 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 SNAI3Q3KNW1 292 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 SLC36A3Q495N2 470 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 LRTOMTQ8WZ04 291 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 SLC22A4Q9H015 551 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 PNRC2Q9NPJ4 139 aaKnown RBP21.37■■□□□ 1.01
PVT1-219ENST00000523427 TRIM36Q9NQ86 728 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 CAPN7Q9Y6W3 813 aa21.37■■□□□ 1.01
PVT1-219ENST00000523427 C5orf63A6NC05 138 aa21.36■■□□□ 1.01
PVT1-219ENST00000523427 M0R135 149 aa21.36■■□□□ 1.01
PVT1-219ENST00000523427 GMDSO60547 372 aa21.36■■□□□ 1.01
PVT1-219ENST00000523427 ANOS1P23352 680 aa21.36■■□□□ 1.01
PVT1-219ENST00000523427 RPS27P42677 84 aaKnown RBP21.36■■□□□ 1.01
PVT1-219ENST00000523427 ELF3P78545 371 aaPredicted RBP21.36■■□□□ 1.01
PVT1-219ENST00000523427 EGR3Q06889 387 aa21.36■■□□□ 1.01
PVT1-219ENST00000523427 FANK1Q8TC84 345 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms