RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SYNPRQ8TBG9 265 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 PNPT1Q8TCS8 783 aaKnown RBP5.48□□□□□ -1.53
SDCBP-210ENST00000522843 XAGE5Q8WWM1 108 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 SGCDQ92629 289 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 DYRK2Q92630 601 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 MAL2Q969L2 176 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 NMD3Q96D46 503 aaKnown RBP5.48□□□□□ -1.53
SDCBP-210ENST00000522843 ELMOD3Q96FG2 381 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 SLC47A1Q96FL8 570 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 TMEM19Q96HH6 336 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 SLC35G5Q96KT7 338 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 RDH12Q96NR8 316 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 OR2M2Q96R28 347 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF184Q99676 751 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-210ENST00000522843 SLC30A2Q9BRI3 323 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 C9orf16Q9BUW7 83 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 SLC38A1Q9H2H9 487 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 OR51B6Q9H340 312 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 EXOSC3Q9NQT5 275 aaKnown RBP5.48□□□□□ -1.53
SDCBP-210ENST00000522843 DECR2Q9NUI1 292 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 USE1Q9NZ43 259 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 RAB26Q9ULW5 256 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 AURKCQ9UQB9 309 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 IFT52Q9Y366 437 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 NPTNQ9Y639 398 aa5.48□□□□□ -1.53
SDCBP-210ENST00000522843 IGHV2-70DA0A0C4DH43 119 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 WI2-2373I1.2A0A1W2PRP0 233 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 ZSCAN5BA6NJL1 495 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 C5orf58C9J3I9 102 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 E9PQ18 207 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 M0R3G1 203 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 DLGAP1O14490 977 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 SPRY3O43610 288 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 NPIPB7O75200 414 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 STX11O75558 287 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 TIPRLO75663 272 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 INMTO95050 263 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 VAMP5O95183 116 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 HPRP00739 348 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 IGHV4-59P01825 116 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 NR2F1P10589 423 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 PNMTP11086 282 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 B4GALT1P15291 398 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 PRKAR1BP31321 381 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 SOAT1P35610 550 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 HSPA13P48723 471 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 RPL15P61313 204 aaKnown RBP5.47□□□□□ -1.53
SDCBP-210ENST00000522843 GALK2Q01415 458 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 ZMYND11Q15326 602 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 SYPL1Q16563 259 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 DUSP7Q16829 419 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 IFI44LQ53G44 452 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 OR2T5Q6IEZ7 315 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 TNFAIP8L2Q6P589 184 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-210ENST00000522843 NHLRC1Q6VVB1 395 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 FRRS1Q6ZNA5 592 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 ZBTB49Q6ZSB9 765 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 AMIGO2Q86SJ2 522 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 LRRC28Q86X40 367 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-210ENST00000522843 KRT73Q86Y46 540 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 CCDC36Q8IYA8 594 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 FAM86B1Q8N7N1 296 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 OR2T29Q8NH02 315 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 OR5K1Q8NHB7 308 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 GEMIN6Q8WXD5 167 aaKnown RBP5.47□□□□□ -1.53
SDCBP-210ENST00000522843 DNAJC9Q8WXX5 260 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 SIGLEC11Q96RL6 698 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 SEPHS2Q99611 448 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 EPYCQ99645 322 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 SLC29A1Q99808 456 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 PTDSS2Q9BVG9 487 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 POLR2J2Q9GZM3 115 aaKnown RBP5.47□□□□□ -1.53
SDCBP-210ENST00000522843 GABARAPL1Q9H0R8 117 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 POLR2J3Q9H1A7 115 aaKnown RBP5.47□□□□□ -1.53
SDCBP-210ENST00000522843 NDUFAF4Q9P032 175 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 RASD1Q9Y272 281 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 SLC35A3Q9Y2D2 325 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 POMT1Q9Y6A1 747 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 ENPP4Q9Y6X5 453 aa5.47□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF816-ZNF321PA0A0X1KG74 233 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 ARRDC5A6NEK1 342 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 H0YAE9 185 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 FAAHO00519 579 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 TNFRSF13BO14836 293 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-210ENST00000522843 FMO6PO60774 539 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 TSPAN9O75954 239 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 CST1P01037 141 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 IGHV3-13P01766 116 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 SERPINA5P05154 406 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 ALPLP05186 524 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 FABP3P05413 133 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 CD1AP06126 327 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 WNT2P09544 360 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 UQCRBP14927 111 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 MPV17P39210 176 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 ALDH3A2P51648 485 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 SMIM11AP58511 58 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 EPS8Q12929 822 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 RAB32Q13637 225 aa5.46□□□□□ -1.54
SDCBP-210ENST00000522843 MFSD13AQ14CX5 517 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms