RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 DPY19L2P2Q6ZN68 376 aa12.61□□□□□ -0.39
TRAPPC9-213ENST00000522504 Q6ZSV7 163 aa12.61□□□□□ -0.39
TRAPPC9-213ENST00000522504 UBE2FQ969M7 185 aa12.61□□□□□ -0.39
TRAPPC9-213ENST00000522504 PITX2Q99697 317 aa12.61□□□□□ -0.39
TRAPPC9-213ENST00000522504 SRA1Q9HD15 236 aaKnown RBP12.61□□□□□ -0.39
TRAPPC9-213ENST00000522504 ERVK-18Q9QC07 812 aa12.61□□□□□ -0.39
TRAPPC9-213ENST00000522504 ENPP4Q9Y6X5 453 aa12.61□□□□□ -0.39
TRAPPC9-213ENST00000522504 A0A1B0GW55 424 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 A0A1W2PRQ8 180 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 SLC22A31A6NKX4 558 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 CD300LBA8K4G0 201 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 OR10H3O60404 316 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 PTBP3O95758 552 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 GYPAP02724 150 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 LCATP04180 440 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 LIPFP07098 398 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 DUX4L2P0CJ85 424 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 DUX4L3P0CJ86 424 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 DUX4L4P0CJ87 422 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 DUX4L5P0CJ88 424 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 DUX4L6P0CJ89 424 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 DUX4L7P0CJ90 424 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 GGT2P36268 569 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 RPL15P61313 204 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 ELF3P78545 371 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 PRB3Q04118 309 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 DGCR6Q14129 220 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 OR8G1Q15617 311 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 OR8B8Q15620 311 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 METTL11BQ5VVY1 283 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 DUX4L9Q6RFH8 374 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 ZNF826PQ6ZT77 177 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 FKBP9P1Q75LS8 142 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 PGAP1Q75T13 922 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 RRM2BQ7LG56 351 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 LDLRAD3Q86YD5 345 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 ZSCAN4Q8NAM6 433 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 FAM110DQ8TAY7 271 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 TBC1D15Q8TC07 691 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 SPRYD4Q8WW59 207 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 NMNAT3Q96T66 252 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 ATF6BQ99941 703 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 TRIM15Q9C019 465 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 SEMA6AQ9H2E6 1030 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 ANKRD19PQ9H560 264 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 FN3KRPQ9HA64 309 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 NDUFAF4Q9P032 175 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 DUX4Q9UBX2 424 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 CYB5R1Q9UHQ9 305 aa12.6□□□□□ -0.39
TRAPPC9-213ENST00000522504 UNC119BA6NIH7 251 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 NME4O00746 187 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 H1F0P07305 194 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 NCK1P16333 377 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 CRABP1P29762 137 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 ZNF92Q03936 586 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 MAPRE2Q15555 327 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 SNAI3Q3KNW1 292 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 FGD3Q5JSP0 725 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 PGM2L1Q6PCE3 622 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 BTN2A1Q7KYR7 527 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 FAM90A1Q86YD7 464 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 PNLDC1Q8NA58 520 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 OR2AE1Q8NHA4 323 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 MAP6Q96JE9 813 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 ERMAPQ96PL5 475 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 FUZQ9BT04 418 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 ADAT1Q9BUB4 502 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 NDEL1Q9GZM8 345 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 FN3KQ9H479 309 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 TCF7L1Q9HCS4 588 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 C1orf123Q9NWV4 160 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 ADA2Q9NZK5 511 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 KIF17Q9P2E2 1029 aa12.59□□□□□ -0.39
TRAPPC9-213ENST00000522504 IGHV3OR15-7A0A075B7D8 119 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 OOEPA6NGQ2 149 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 DVL1O14640 695 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 DIRAS1O95057 198 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 PSKH1P11801 424 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 HIST1H1CP16403 213 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 GSK3BP49841 420 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 RPS6KA3P51812 740 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 SLC7A2P52569 658 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 DLX1P56177 255 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 MALLQ13021 153 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 SMARCD3Q6STE5 483 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 MRPL21Q7Z2W9 205 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 ZBTB46Q86UZ6 589 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 GCSAMQ8N6F7 178 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 OR4K13Q8NH42 304 aa12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 RPRD1BQ9NQG5 326 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 MRPL22Q9NWU5 206 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-213ENST00000522504 OR6C68A6NDL8 312 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 GSTA4O15217 222 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 LHBP01229 141 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 GRPP07492 148 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 RPS27P42677 84 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 ECH1Q13011 328 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 KCNJ8Q15842 424 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 GLYATL3Q5SZD4 288 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 HIST2H2BDQ6DRA6 164 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms