RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CLEC1BQ9P126 229 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 CCDC163A0A0D9SF12 145 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 A0A1W2PQF6 199 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 OR5H14A6NHG9 310 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 M0QYG6 137 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 DHHO43323 396 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 IL5P05113 134 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 CAMK2BQ13554 666 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 ANKRD37Q7Z713 158 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 OR2AK2Q8NG84 335 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 PIGTQ969N2 578 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 PLEKHA2Q9HB19 425 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 PLSCR3Q9NRY6 295 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 RNF150Q9ULK6 438 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 POLDIP2Q9Y2S7 368 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 ATP23Q9Y6H3 246 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 M0R135 149 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 H2AFB1P0C5Y9 115 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 SLC2A1P11166 492 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 ADIRFQ15847 76 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 ZNF799Q96GE5 643 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 FGF20Q9NP95 211 aaPredicted RBP14.63□□□□□ -0.07
USP42-207ENST00000521713 BCL2L11O43521 198 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 CD80P33681 288 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 VN1R4Q7Z5H5 301 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 OR51A2Q8NGJ7 313 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 CSAG2Q9Y5P2 127 aa14.63□□□□□ -0.07
USP42-207ENST00000521713 OTOL1A6NHN0 477 aaPredicted RBP14.62□□□□□ -0.07
USP42-207ENST00000521713 H7BYZ3 331 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 BET1O15155 118 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 PTAFRP25105 342 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 COL13A1Q5TAT6 717 aaPredicted RBP14.62□□□□□ -0.07
USP42-207ENST00000521713 TMEM18Q96B42 140 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 ZNF75AQ96N20 296 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 LHX9Q9NQ69 397 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 ST8SIA3O43173 380 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 LGALS4P56470 323 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 HNF4GQ14541 408 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 OR8G1Q15617 311 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 NKG7Q16617 165 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 ACSM5Q6NUN0 579 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 FAM58AQ8N1B3 248 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 LRRC3BQ96PB8 259 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 PCOLCE2Q9UKZ9 415 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 J3QR89 54 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 TNFSF11O14788 317 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 HOXD11P31277 338 aaPredicted RBP14.62□□□□□ -0.07
USP42-207ENST00000521713 GLYATL3Q5SZD4 288 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 SFRP5Q5T4F7 317 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 HIPK2Q9H2X6 1198 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 MED29Q9NX70 200 aa14.62□□□□□ -0.07
USP42-207ENST00000521713 SPINT2O43291 252 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 XRCC2O43543 280 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 GRPP07492 148 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 ACSM4P0C7M7 580 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 OR13C7P0DN81 318 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 TOLLIPQ9H0E2 274 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 BCO1Q9HAY6 547 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 METTL15P1P0C7V9 234 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 AADACP22760 399 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 PAX6P26367 422 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 RBP2P50120 134 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 DUSP2Q05923 314 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 SOWAHCQ53LP3 525 aaPredicted RBP14.61□□□□□ -0.07
USP42-207ENST00000521713 PWWP2BQ6NUJ5 590 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 PRSS45Q7RTY3 260 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 OR1J1Q8NGS3 322 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 OR6K3Q8NGY3 331 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 OR2G3Q8NGZ4 309 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 WNK3Q9BYP7 1800 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 EMP3P54852 163 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 EDDM3BP56851 147 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 FN3KRPQ9HA64 309 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 DLEC1Q9Y238 1755 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 SCO1O75880 301 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 MMP15P51511 669 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 TMPRSS7Q7RTY8 843 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 WFDC8Q8IUA0 241 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 BHLHE23Q8NDY6 225 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 H1FXQ92522 213 aaKnown RBP14.61□□□□□ -0.07
USP42-207ENST00000521713 LOXL4Q96JB6 756 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 ZFP64Q9NPA5 681 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 NECAP2Q9NVZ3 263 aa14.61□□□□□ -0.07
USP42-207ENST00000521713 MBP02144 154 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 ADRA2CP18825 462 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 RAD52P43351 418 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 EGR3Q06889 387 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 KIAA0040Q15053 153 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 SHBQ15464 509 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 GLIPR1L1Q6UWM5 242 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 ANGPTL5Q86XS5 388 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 GABRG1Q8N1C3 465 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 OR2Y1Q8NGV0 311 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 SMIM4Q8WVI0 70 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 TMED6Q8WW62 240 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 DVL3Q92997 716 aaPredicted RBP14.6□□□□□ -0.07
USP42-207ENST00000521713 ATF6BQ99941 703 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 C1QTNF6Q9BXI9 259 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 SLC5A6Q9Y289 635 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 KIAA1217Q5T5P2 1943 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms