RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 RBBP8Q99708 897 aa1.69□□□□□ -2.14
SKP1-207ENST00000520417 ANKRD60Q9BZ19 345 aa1.69□□□□□ -2.14
SKP1-207ENST00000520417 MRM3Q9HC36 420 aaKnown RBP1.69□□□□□ -2.14
SKP1-207ENST00000520417 CCNB1IP1Q9NPC3 277 aa1.69□□□□□ -2.14
SKP1-207ENST00000520417 SLC39A1Q9NY26 324 aa1.69□□□□□ -2.14
SKP1-207ENST00000520417 GCNT4Q9P109 453 aa1.69□□□□□ -2.14
SKP1-207ENST00000520417 PALLDQ8WX93 1383 aa1.69□□□□□ -2.14
SKP1-207ENST00000520417 SMIM26A0A096LP01 95 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 IGHV1-69DA0A0B4J2H0 117 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 CENPVL3A0A0U1RRI6 287 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 A0A1W2PNN7 141 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 TRIM64CA6NLI5 447 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 H7C1H1 209 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 PLPP1O14494 284 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 SLC9A3R1O14745 358 aaPredicted RBP1.68□□□□□ -2.14
SKP1-207ENST00000520417 CHMP2AO43633 222 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 EIF1BO60739 113 aaKnown RBP1.68□□□□□ -2.14
SKP1-207ENST00000520417 OR2F2O95006 317 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 HBE1P02100 147 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 CD74P04233 296 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 ERCC1P07992 297 aaPredicted RBP1.68□□□□□ -2.14
SKP1-207ENST00000520417 EIF1P41567 113 aaKnown RBP1.68□□□□□ -2.14
SKP1-207ENST00000520417 GDI2P50395 445 aaKnown RBP1.68□□□□□ -2.14
SKP1-207ENST00000520417 PRR3P79522 188 aaKnown RBP1.68□□□□□ -2.14
SKP1-207ENST00000520417 SEMG2Q02383 582 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 CUL2Q13617 745 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 C1orf185Q5T7R7 199 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 SPINT4Q6UDR6 99 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 SPESP1Q6UW49 350 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 GABRG1Q8N1C3 465 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 CCDC148Q8NFR7 591 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 OR1J4Q8NGS1 313 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 NRBF2Q96F24 287 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 ZNF317Q96PQ6 595 aaPredicted RBP1.68□□□□□ -2.14
SKP1-207ENST00000520417 GGTLC1Q9BX51 225 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 ZYG11BQ9C0D3 744 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 NEUROG2Q9H2A3 272 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 TMEM38AQ9H6F2 299 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 GEMIN7Q9H840 131 aaKnown RBP1.68□□□□□ -2.14
SKP1-207ENST00000520417 RAB20Q9NX57 234 aa1.68□□□□□ -2.14
SKP1-207ENST00000520417 UBN2Q6ZU65 1347 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 A0A0J9YXV3 536 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 PDZK1P1A8MUH7 402 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 KRBOX1C9JBD0 128 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 GABRPO00591 440 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 AQP8O94778 261 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 PAHP00439 452 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 HPRT1P00492 218 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 STOMP27105 288 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 RPS11P62280 158 aaKnown RBP eCLIP1.67□□□□□ -2.14
SKP1-207ENST00000520417 BEX3Q00994 111 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 IDI1Q13907 227 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 NCF4Q15080 339 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 METAP1DQ6UB28 335 aaPredicted RBP1.67□□□□□ -2.14
SKP1-207ENST00000520417 SSX9Q7RTT3 188 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 JAGN1Q8N5M9 183 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 C11orf72Q8NBR9 251 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 C1orf64Q8NEQ6 169 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 OR10G6Q8NH81 332 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 NRGNQ92686 78 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 C8orf44Q96CB5 159 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 SHANK2-AS3Q9BTD1 123 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 UCK2Q9BZX2 261 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 SLC7A5P2Q9GIP4 190 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 EXOSC4Q9NPD3 245 aaKnown RBP1.67□□□□□ -2.14
SKP1-207ENST00000520417 C8orf17Q9NRJ1 99 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 C20orf96Q9NUD7 363 aaPredicted RBP1.67□□□□□ -2.14
SKP1-207ENST00000520417 RHBDL2Q9NX52 303 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 CBY1Q9Y3M2 126 aa1.67□□□□□ -2.14
SKP1-207ENST00000520417 SAMHD1Q9Y3Z3 626 aaKnown RBP1.67□□□□□ -2.14
SKP1-207ENST00000520417 SEC16AO15027 2179 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 ARPC4-TTLL3A0A0A6YYG9 625 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 IGKV1-8A0A0C4DH67 115 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 A6NDN8 102 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 ZNF98A6NK75 572 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 OR5H1A6NKK0 313 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 TEX46H3BTG2 121 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 J3QRE1 110 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 IGHV3-11P01762 117 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 CLTAP09496 248 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 LGALS3P17931 250 aaKnown RBP1.66□□□□□ -2.14
SKP1-207ENST00000520417 GFERP55789 205 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 PPIDQ08752 370 aaKnown RBP1.66□□□□□ -2.14
SKP1-207ENST00000520417 HSDL1Q3SXM5 330 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 YIF1BQ5BJH7 314 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 RNASE13Q5GAN3 156 aaKnown RBP1.66□□□□□ -2.14
SKP1-207ENST00000520417 BZW1Q7L1Q6 419 aaKnown RBP1.66□□□□□ -2.14
SKP1-207ENST00000520417 SCD5Q86SK9 330 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 HORMAD1Q86X24 394 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 CBLN2Q8IUK8 224 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 TMEM105Q8N8V8 129 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 UBAC2Q8NBM4 344 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 HAUS1Q96CS2 278 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 RNF145Q96MT1 663 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 C11orf70Q9BRQ4 267 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 ANGPTL4Q9BY76 406 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 SLIRPQ9GZT3 109 aaKnown RBP1.66□□□□□ -2.14
SKP1-207ENST00000520417 ACP6Q9NPH0 428 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 C21orf62Q9NYP8 219 aa1.66□□□□□ -2.14
SKP1-207ENST00000520417 SLC17A7Q9P2U7 560 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms