RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 ZZEF1O43149 2961 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 SPTA1P02549 2419 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 LOC100506127A0A0U1RQW1 187 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 OR6C65A6NJZ3 312 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 OR4C45A6NMZ5 311 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 HSPB2A8KAH6 182 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 DVL2O14641 736 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 RER1O15258 196 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 TMCC2O75069 709 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 ZNF254O75437 659 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 SC5DO75845 299 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 RPP14O95059 124 aaKnown RBP6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 TRAPPC2P0DI81 140 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 TRAPPC2BP0DI82 140 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 NPR2P20594 1047 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 GALP22466 123 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 FGF9P31371 208 aaPredicted RBP6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 OR3A2P47893 321 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 FOXG1P55316 489 aaPredicted RBP6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 RPS11P62280 158 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 ARF1P84077 181 aaKnown RBP6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 SLC3A1Q07837 685 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 MRPL28Q13084 256 aaKnown RBP6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 INSL4Q14641 139 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 HSPB2Q16082 182 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 TM4SF20Q53R12 229 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 PRR30Q53SZ7 412 aaPredicted RBP6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 NSUN5P2Q63ZY6 315 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 KCTD18Q6PI47 426 aaPredicted RBP6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 DEGS2Q6QHC5 323 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 ZNF627Q7L945 461 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 P4HA3Q7Z4N8 544 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 MCEMP1Q8IX19 187 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 PRSS35Q8N3Z0 413 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 YIPF7Q8N8F6 280 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 IL17RDQ8NFM7 739 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 OR2G2Q8NGZ5 317 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 FAM57AQ8TBR7 257 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 GHSRQ92847 366 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 APH1AQ96BI3 265 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 SNRNP40Q96DI7 357 aaKnown RBP6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 SLAMF6Q96DU3 332 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 SMIM19Q96E16 107 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 FBXO17Q96EF6 278 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 TMED9Q9BVK6 235 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 PPIL3Q9H2H8 161 aaKnown RBP6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 TMEM165Q9HC07 324 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 TXNL4BQ9NX01 149 aaKnown RBP6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 PRSS50Q9UI38 385 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 IKZF2Q9UKS7 526 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 FBXL3Q9UKT7 428 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 LRP12Q9Y561 859 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 FAM215AQ9Y5M1 114 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 COL6A6A6NMZ7 2263 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 TRBV2A0A0J9YWF9 115 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 FAM172BPA6NC97 362 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 MBD3L4A6NDZ8 208 aaPredicted RBP6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 MBD3L3A6NE82 208 aaPredicted RBP6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 MBD3L5A6NJ08 208 aaPredicted RBP6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 GABRPO00591 440 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 WDR1O75083 606 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 TOXO94900 526 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 ZFPL1O95159 310 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 KNG1P01042 644 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 HLA-DPB1P04440 258 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 CST2P09228 141 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 GSTT2P0CG29 244 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 GSTT2BP0CG30 244 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 B4GALT1P15291 398 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 NAT1P18440 290 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 CTSSP25774 331 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 GUCA1AP43080 201 aaPredicted RBP6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 KIR3DL2P43630 455 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 GDI2P50395 445 aaKnown RBP6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 RIDAP52758 137 aaKnown RBP6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 MFGE8Q08431 387 aaPredicted RBP6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 FOXF2Q12947 444 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 ALKBH1Q13686 389 aaKnown RBP6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 TRAM1Q15629 374 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 RSPO1Q2MKA7 263 aaPredicted RBP6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 NRN1LQ496H8 165 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 WDR38Q5JTN6 314 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 SPANXN2Q5MJ10 180 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 C1QTNF12Q5T7M4 302 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 CD276Q5ZPR3 534 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 C22orf42Q6IC83 251 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 OR7E24Q6IFN5 339 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 ZNF544Q6NX49 715 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 UNQ9370/PRO34162Q6UXP9 181 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 TFAP2EQ6VUC0 442 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 RHOUQ7L0Q8 258 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 FAM220AQ7Z4H9 259 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 KRT77Q7Z794 578 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 CATSPERDQ86XM0 798 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 SKA3Q8IX90 412 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 ZNF100Q8IYN0 542 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 GCNT2Q8N0V5 402 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 LRRC18Q8N456 261 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 SLC22A24Q8N4F4 322 aa6.85□□□□□ -1.31
CTHRC1-203ENST00000520337 POC5Q8NA72 575 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms