RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 MAN2C1Q9NTJ4 1040 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 NUDT15Q9NV35 164 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 CALML5Q9NZT1 146 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 PPP1R3CQ9UQK1 317 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 POMPQ9Y244 141 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 AP3M1Q9Y2T2 418 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 FAM96BQ9Y3D0 163 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 FIS1Q9Y3D6 152 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 SOX21Q9Y651 276 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 U3KQK5 164 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 TRAV36DV7A0A075B6V5 113 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 IGHV1-69DA0A0B4J2H0 117 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 A0A0U1RQK1 487 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 CENPVL3A0A0U1RRI6 287 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 A0A1B0GWJ7 208 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 hCG_1807616A0A1W2PRN6 198 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF320A2RRD8 509 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 LRRC30A6NM36 301 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 CLDN24A6NM45 220 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 NUDT19A8MXV4 375 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 TMEM178BH3BS89 294 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ACOT8O14734 319 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 MRASO14807 208 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 CLN5O75503 358 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ZFPL1O95159 310 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 IGHV1-69P01742 117 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 HMGN1P05114 100 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 CTRB1P17538 263 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 GSTM3P21266 225 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 CFHR2P36980 270 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 HTR2BP41595 481 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 KIR2DS4P43632 304 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 CSNK1A1P48729 337 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 PITPNBP48739 271 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ARHGDIAP52565 204 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 EFNB2P52799 333 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 SUMO1P63165 101 aaKnown RBP4.04□□□□□ -1.76
SDCBP-207ENST00000520168 SLC35A2P78381 396 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 HSF2Q03933 536 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 EGR4Q05215 589 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 PUDPQ08623 228 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 SCRN3Q0VDG4 424 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 FUT5Q11128 374 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 BNIP2Q12982 314 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 FLOT2Q14254 428 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 TRIM25Q14258 630 aaKnown RBP4.04□□□□□ -1.76
SDCBP-207ENST00000520168 PTGR1Q14914 329 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 KCNJ8Q15842 424 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 AANATQ16613 207 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 DPY19L1Q2PZI1 675 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF404Q494X3 552 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 IGSF11Q5DX21 431 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 FAM76BQ5HYJ3 339 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 PHYHD1Q5SRE7 291 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 CASC10Q5T4H9 136 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 RNF220Q5VTB9 566 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 CARD17Q5XLA6 110 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 CTRB2Q6GPI1 263 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 C8orf82Q6P1X6 216 aaPredicted RBP4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ARL9Q6T311 187 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 DCDC5Q6ZRR9 648 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 SLC16A14Q7RTX9 510 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 PXKQ7Z7A4 578 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ANKRD46Q86W74 232 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 VRK2Q86Y07 508 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 NDUFA11Q86Y39 141 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 RIMKLAQ8IXN7 391 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 PAQR4Q8N4S7 273 aaPredicted RBP4.04□□□□□ -1.76
SDCBP-207ENST00000520168 PAPD5Q8NDF8 572 aaKnown RBP4.04□□□□□ -1.76
SDCBP-207ENST00000520168 HIPK4Q8NE63 616 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 SLC24A4Q8NFF2 622 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 OR8J2Q8NGG1 315 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 OR4C13Q8NGP0 309 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 OR2T11Q8NH01 316 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 OR2T6Q8NHC8 308 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 TEX47Q8TBZ9 253 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 PTP4A1Q93096 173 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ZG16BQ96DA0 208 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ASB9Q96DX5 294 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 DUS3LQ96G46 650 aaKnown RBP4.04□□□□□ -1.76
SDCBP-207ENST00000520168 MED30Q96HR3 178 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 RCC1LQ96I51 464 aaKnown RBP4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ZBTB18Q99592 522 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 EPYCQ99645 322 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 PCGF1Q9BSM1 259 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 PTDSS2Q9BVG9 487 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ASPNQ9BXN1 380 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 SLC38A1Q9H2H9 487 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 OR51B6Q9H340 312 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 MUC13Q9H3R2 512 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 TUBB1Q9H4B7 451 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ELOVL3Q9HB03 270 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 SPAG4Q9NPE6 437 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 SLC35D1Q9NTN3 355 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 TMEM38BQ9NVV0 291 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 AIG1Q9NVV5 245 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ADA2Q9NZK5 511 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 CCDC167Q9P0B6 97 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 ZNRD1Q9P1U0 126 aa4.04□□□□□ -1.76
SDCBP-207ENST00000520168 SH3GLB1Q9Y371 365 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms