RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 FAM214BQ7L5A3 538 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 PRSS45Q7RTY3 260 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 NRARPQ7Z6K4 114 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 DOLPP1Q86YN1 238 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 MED12LQ86YW9 2145 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 OR8B12Q8NGG6 310 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 MRI1Q9BV20 369 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 TP63Q9H3D4 680 aaPredicted RBP12.67□□□□□ -0.38
CLN8-204ENST00000519254 MOB1AQ9H8S9 216 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 ZNF275Q9NSD4 429 aaPredicted RBP12.67□□□□□ -0.38
CLN8-204ENST00000519254 UPB1Q9UBR1 384 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 PRSS50Q9UI38 385 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 SLC5A6Q9Y289 635 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 MBD3L4A6NDZ8 208 aaPredicted RBP12.66□□□□□ -0.38
CLN8-204ENST00000519254 MBD3L3A6NE82 208 aaPredicted RBP12.66□□□□□ -0.38
CLN8-204ENST00000519254 MBD3L5A6NJ08 208 aaPredicted RBP12.66□□□□□ -0.38
CLN8-204ENST00000519254 FOXF2Q12947 444 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 CEACAM16Q2WEN9 425 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 C11orf91Q3C1V1 193 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 TRIQKQ629K1 86 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 FAM166AQ6J272 317 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 PYHIN1Q6K0P9 492 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 ZNF283Q8N7M2 679 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 MBD3L2Q8NHZ7 208 aaPredicted RBP12.66□□□□□ -0.38
CLN8-204ENST00000519254 OR51E1Q8TCB6 317 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 NEDD4LQ96PU5 975 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 C11orf54Q9H0W9 315 aaPredicted RBP12.66□□□□□ -0.38
CLN8-204ENST00000519254 CKLFQ9UBR5 152 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 STEAP1Q9UHE8 339 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 SYT7O43581 403 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 LANCL1O43813 399 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 UBL3O95164 117 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 ITGA5P08648 1049 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 CST2P09228 141 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 NR4A2P43354 598 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 GALK2Q01415 458 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 FAPQ12884 760 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 ELFN2Q5R3F8 820 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 VWA1Q6PCB0 445 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 NAA40Q86UY6 237 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 CADM3Q8N126 398 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 PLPP7Q8NBV4 271 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 OR51A2Q8NGJ7 313 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 OR1J2Q8NGS2 313 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 FGGYQ96C11 551 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 ABCG5Q9H222 651 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 N6AMT1Q9Y5N5 214 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 ETV7Q9Y603 341 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 ATRXP46100 2492 aa12.66□□□□□ -0.38
CLN8-204ENST00000519254 C5orf63A6NC05 138 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 OR6C65A6NJZ3 312 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 ZNF587BE7ETH6 402 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 E9PLN8 166 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 SLC17A2O00624 439 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 TOXO94900 526 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 IL2RAP01589 272 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 TMIGD3P0DMS9 266 aaPredicted RBP12.65□□□□□ -0.38
CLN8-204ENST00000519254 B4GALT1P15291 398 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 OTX1P32242 354 aaPredicted RBP12.65□□□□□ -0.38
CLN8-204ENST00000519254 KIR2DL2P43627 348 aaPredicted RBP12.65□□□□□ -0.38
CLN8-204ENST00000519254 PLA2G7Q13093 441 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 FAM57BQ71RH2 274 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 LUZP2Q86TE4 346 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 C19orf18Q8NEA5 215 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 SLC7A6Q92536 515 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 TRIM63Q969Q1 353 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 ADAT3Q96EY9 351 aaPredicted RBP12.65□□□□□ -0.38
CLN8-204ENST00000519254 WBP1Q96G27 269 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 DOCK7Q96N67 2140 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 FOXB1Q99853 325 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 THAP7Q9BT49 309 aaPredicted RBP12.65□□□□□ -0.38
CLN8-204ENST00000519254 SOX7Q9BT81 388 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 LINC00470Q9BZP3 86 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 ZNF835Q9Y2P0 537 aa12.65□□□□□ -0.38
CLN8-204ENST00000519254 MYO7BQ6PIF6 2116 aa12.65□□□□□ -0.39
CLN8-204ENST00000519254 A0A1B0GVI7 797 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 HOXD4P09016 255 aaPredicted RBP12.64□□□□□ -0.39
CLN8-204ENST00000519254 OR3A2P47893 321 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 SCAND1P57086 179 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 SPOCK1Q08629 439 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 GUSBP1Q15486 140 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 BAIAP2L2Q6UXY1 529 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 NCCRP1Q6ZVX7 275 aaPredicted RBP12.64□□□□□ -0.39
CLN8-204ENST00000519254 LYPD6Q86Y78 171 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 IZUMO1Q8IYV9 350 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 SLC22A24Q8N4F4 322 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 NAXEQ8NCW5 288 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 SYNPRQ8TBG9 265 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 SLC25A28Q96A46 364 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 NKX3-1Q99801 234 aaPredicted RBP12.64□□□□□ -0.39
CLN8-204ENST00000519254 GPR84Q9NQS5 396 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 PLEK2Q9NYT0 353 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 TRGV8A0A0C4DH27 118 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 MEGF11A6BM72 1044 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 F5H5K5 113 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 SYNGR3O43761 229 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 DBHP09172 617 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 GLI4P10075 376 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 CCL1P22362 96 aa12.64□□□□□ -0.39
CLN8-204ENST00000519254 DDOSTP39656 456 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms