RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 STEAP2Q8NFT2 490 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 OR10G3Q8NGC4 313 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 ZNF519Q8TB69 540 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 ZPLD1Q8TCW7 415 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 RNF128Q8TEB7 428 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 TSEN15Q8WW01 171 aaKnown RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 MARC2Q969Z3 335 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 SMAD5Q99717 465 aaKnown RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 NPAS1Q99742 590 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 POFUT1Q9H488 388 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 FANCFQ9NPI8 374 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 VSX1Q9NZR4 365 aaPredicted RBP16.3■□□□□ 0.2
SDC2-202ENST00000518385 TCFL5Q9UL49 500 aa16.3■□□□□ 0.2
SDC2-202ENST00000518385 A0A087WZY1 265 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 RNF222A6NCQ9 220 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 OR5H14A6NHG9 310 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 SPDEFO95238 335 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 SIX6O95475 246 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 CYB5AP00167 134 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 RLN2P04090 185 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 PRKACAP17612 351 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 CD34P28906 385 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 GSK3AP49840 483 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 SLC17A1Q14916 467 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 C2orf68Q2NKX9 166 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 LY6G6FQ5SQ64 297 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 DCAF12L2Q5VW00 463 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 JMJD6Q6NYC1 403 aaPredicted RBP16.29■□□□□ 0.2
SDC2-202ENST00000518385 H1FNTQ75WM6 255 aaPredicted RBP16.29■□□□□ 0.2
SDC2-202ENST00000518385 ZNF679Q8IYX0 411 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 SVBPQ8N300 66 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 NKAIN3Q8N8D7 197 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 OR51D1Q8NGF3 324 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 STOML3Q8TAV4 291 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 LRRC46Q96FV0 321 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 PTGES2Q9H7Z7 377 aa16.29■□□□□ 0.2
SDC2-202ENST00000518385 FAM186AA6NE01 2351 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 NSG1A0A0A6YYJ2 146 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 PRSS37A4D1T9 235 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 LGALS8O00214 317 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 IL2RAP01589 272 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 CD3DP04234 171 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 TMIGD3P0DMS9 266 aaPredicted RBP16.28■□□□□ 0.2
SDC2-202ENST00000518385 HOXA1P49639 335 aaPredicted RBP16.28■□□□□ 0.2
SDC2-202ENST00000518385 UBE2MP61081 183 aaKnown RBP16.28■□□□□ 0.2
SDC2-202ENST00000518385 SSPNQ14714 243 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 ACKR1Q16570 336 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 PLPPR5Q32ZL2 321 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 SLC18B1Q6NT16 456 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 ADGRE4PQ86SQ3 457 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 LSRQ86X29 649 aaPredicted RBP16.28■□□□□ 0.2
SDC2-202ENST00000518385 FADS6Q8N9I5 356 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 ADPRHL1Q8NDY3 354 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 OR6N2Q8NGY6 317 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 SEH1LQ96EE3 360 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 WDR89Q96FK6 387 aaPredicted RBP16.28■□□□□ 0.2
SDC2-202ENST00000518385 GPR87Q9BY21 358 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 ATG5Q9H1Y0 275 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 B3GALT5Q9Y2C3 310 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 KLHDC2Q9Y2U9 406 aa16.28■□□□□ 0.2
SDC2-202ENST00000518385 C21orf140B9A014 251 aa16.27■□□□□ 0.2
SDC2-202ENST00000518385 H7C2Y5 167 aa16.27■□□□□ 0.2
SDC2-202ENST00000518385 TERTO14746 1132 aaKnown RBP16.27■□□□□ 0.2
SDC2-202ENST00000518385 TAS2R31P59538 309 aa16.27■□□□□ 0.2
SDC2-202ENST00000518385 GABREP78334 506 aa16.27■□□□□ 0.2
SDC2-202ENST00000518385 CYCSP99999 105 aaKnown RBP16.27■□□□□ 0.2
SDC2-202ENST00000518385 SNTB1Q13884 538 aaKnown RBP16.27■□□□□ 0.2
SDC2-202ENST00000518385 PNLIPRP3Q17RR3 467 aa16.27■□□□□ 0.2
SDC2-202ENST00000518385 TMPRSS7Q7RTY8 843 aa16.27■□□□□ 0.2
SDC2-202ENST00000518385 OR2M3Q8NG83 312 aa16.27■□□□□ 0.2
SDC2-202ENST00000518385 SLC25A43Q8WUT9 341 aaPredicted RBP16.27■□□□□ 0.2
SDC2-202ENST00000518385 C1QTNF6Q9BXI9 259 aa16.27■□□□□ 0.2
SDC2-202ENST00000518385 CCDC86Q9H6F5 360 aaKnown RBP16.27■□□□□ 0.2
SDC2-202ENST00000518385 SRA1Q9HD15 236 aaKnown RBP16.27■□□□□ 0.2
SDC2-202ENST00000518385 ALKBH4Q9NXW9 302 aa16.27■□□□□ 0.2
SDC2-202ENST00000518385 DLL3Q9NYJ7 618 aa16.27■□□□□ 0.2
SDC2-202ENST00000518385 DHDHQ9UQ10 334 aa16.27■□□□□ 0.2
SDC2-202ENST00000518385 CHCHD2Q9Y6H1 151 aaPredicted RBP16.27■□□□□ 0.2
SDC2-202ENST00000518385 POM121CA8CG34 1229 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 ZNF736B4DX44 427 aaPredicted RBP16.26■□□□□ 0.19
SDC2-202ENST00000518385 C11orf98E9PRG8 122 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 STMND1H3BQB6 276 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 RAD1O60671 282 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 ATG12O94817 140 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 HTR2CP28335 458 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 CRABP1P29762 137 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 KIR3DL2P43630 455 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 DAP3P51398 398 aaKnown RBP16.26■□□□□ 0.19
SDC2-202ENST00000518385 SSR4P51571 173 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 RPS18P62269 152 aaKnown RBP16.26■□□□□ 0.19
SDC2-202ENST00000518385 FOXF1Q12946 379 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 C1orf100Q5SVJ3 147 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 LYG2Q86SG7 212 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 SLC25A42Q86VD7 318 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 PRSS35Q8N3Z0 413 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 OR1J4Q8NGS1 313 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 THAP6Q8TBB0 222 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 SLC25A28Q96A46 364 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 ZBTB8AQ96BR9 441 aa16.26■□□□□ 0.19
SDC2-202ENST00000518385 NTNG2Q96CW9 530 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms