RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 PTP4A1Q93096 173 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 MAL2Q969L2 176 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 SEH1LQ96EE3 360 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 CCDC115Q96NT0 180 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 DUX3Q96PT4 197 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 CCL13Q99616 98 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 MRPL13Q9BYD1 178 aaKnown RBP4.52□□□□□ -1.69
LINC00535-202ENST00000517785 PRSS22Q9GZN4 317 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 MEGF9Q9H1U4 602 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 TMEM27Q9HBJ8 222 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 TMEM100Q9NV29 134 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 TBCCD1Q9NVR7 557 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 C1orf123Q9NWV4 160 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 NDRG4Q9ULP0 352 aaKnown RBP4.52□□□□□ -1.69
LINC00535-202ENST00000517785 IFT52Q9Y366 437 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 TIMM10BQ9Y5J6 103 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 DYNC1H1Q14204 4646 aaKnown RBP4.52□□□□□ -1.69
LINC00535-202ENST00000517785 TNCP24821 2201 aa4.52□□□□□ -1.69
LINC00535-202ENST00000517785 TRAV38-1A0A0B4J264 116 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 A0A0G2JPF8 293 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 A0A1W2PRG6 482 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 hCG_1807616A0A1W2PRN6 198 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 A6NLC8 198 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 HNRNPCL2B2RXH8 293 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 HNRNPCL3B7ZW38 293 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 E9PBE3 544 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 ZSCAN12O43309 604 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 TPST2O60704 377 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 HNRNPCL1O60812 293 aaKnown RBP4.51□□□□□ -1.69
LINC00535-202ENST00000517785 FSTL3O95633 263 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 KRT75O95678 551 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 LY86O95711 162 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 MT-ATP6P00846 226 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 IGF2P01344 180 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 FGF4P08620 206 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 CST2P09228 141 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 HNRNPCL4P0DMR1 293 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 CHATP28329 748 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 AQP2P41181 271 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 CD200P41217 278 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 RGS6P49758 472 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 RAD23AP54725 363 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 UGT2B15P54855 530 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 RGS8P57771 180 aaPredicted RBP4.51□□□□□ -1.69
LINC00535-202ENST00000517785 GMFBP60983 142 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 RPL11P62913 178 aaKnown RBP4.51□□□□□ -1.69
LINC00535-202ENST00000517785 IL5RAQ01344 420 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 RPL18Q07020 188 aaKnown RBP4.51□□□□□ -1.69
LINC00535-202ENST00000517785 ACSM1Q08AH1 577 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 ECH1Q13011 328 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 MAD2L1Q13257 205 aaPredicted RBP4.51□□□□□ -1.69
LINC00535-202ENST00000517785 NPTX1Q15818 432 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 CCDC153Q494R4 210 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 WDR38Q5JTN6 314 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 FAM27BQ5VT28 67 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 HHATQ5VTY9 493 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 NXNQ6DKJ4 435 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 SLC25A47Q6Q0C1 308 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 COLCA1Q6ZS62 124 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 LHFPL2Q6ZUX7 228 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 CENPVQ7Z7K6 275 aaPredicted RBP4.51□□□□□ -1.69
LINC00535-202ENST00000517785 C4orf33Q8N1A6 199 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 Q8N1Y9 231 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 LSMEM1Q8N8F7 131 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 ACMSDQ8TDX5 336 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 IFT81Q8WYA0 676 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 VPS33AQ96AX1 596 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 NMD3Q96D46 503 aaKnown RBP4.51□□□□□ -1.69
LINC00535-202ENST00000517785 CPPED1Q9BRF8 314 aaPredicted RBP4.51□□□□□ -1.69
LINC00535-202ENST00000517785 TMEM43Q9BTV4 400 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 PSMC3IPQ9P2W1 217 aaPredicted RBP4.51□□□□□ -1.69
LINC00535-202ENST00000517785 BTNL2Q9UIR0 455 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 X6R8D5 127 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 VPS13DQ5THJ4 4388 aa4.51□□□□□ -1.69
LINC00535-202ENST00000517785 A0A1W2PQ09 198 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 TMEM247A6NEH6 219 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 SH2D7A6NKC9 451 aaPredicted RBP4.5□□□□□ -1.69
LINC00535-202ENST00000517785 SMIM23A6NLE4 172 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 CPSF4LA6NMK7 179 aaKnown RBP4.5□□□□□ -1.69
LINC00535-202ENST00000517785 IQCF6A8MYZ5 107 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 H7C1C5 153 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 M0R3H8 397 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 COPEO14579 308 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 ACOT8O14734 319 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 SGCEO43556 437 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 FMO6PO60774 539 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 THY1P04216 161 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 HIST1H2ABP04908 130 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 GRPP07492 148 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 MSR1P21757 451 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 COX7A1P24310 79 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 IL12AP29459 219 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 ALDH3A1P30838 453 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 DAP3P51398 398 aaKnown RBP4.5□□□□□ -1.69
LINC00535-202ENST00000517785 ZNF133P52736 654 aaPredicted RBP4.5□□□□□ -1.69
LINC00535-202ENST00000517785 PCBD1P61457 104 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 UFM1P61960 85 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 LCN6P62502 163 aa4.5□□□□□ -1.69
LINC00535-202ENST00000517785 TXNL4AP83876 142 aaKnown RBP4.5□□□□□ -1.69
LINC00535-202ENST00000517785 LRRC74AQ0VAA2 488 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms