RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 GH1P01241 217 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 MT-ND4P03905 459 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 MAS1P04201 325 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 COX5AP20674 150 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 CRABP2P29373 138 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 RORAP35398 523 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 SERPINB5P36952 375 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 CEACAM3P40198 252 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 MAGEA4P43358 317 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 SLCO1A2P46721 670 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 CCT5P48643 541 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 PKNOX1P55347 436 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 SYNJ2BPP57105 145 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 ZNF121P58317 390 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 ERVK-25P63136 954 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 PNOCQ13519 176 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 ENDOGQ14249 297 aaKnown RBP-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 TATDN3Q17R31 274 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 CARD16Q5EG05 197 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 SYT10Q6XYQ8 523 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 ZCCHC23Q6ZST2 131 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 LYG2Q86SG7 212 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 LRRC28Q86X40 367 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 ACOT4Q8N9L9 421 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 WDR31Q8NA23 367 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 SPPL2BQ8TCT7 592 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 GHSRQ92847 366 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 DNASE1L2Q92874 299 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 FAM131CQ96AQ9 280 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 SLC41A3Q96GZ6 507 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 OXGR1Q96P68 337 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 C16orf95Q9H693 158 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 C1orf123Q9NWV4 160 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 CHCHD3Q9NX63 227 aaKnown RBP-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 OR5V1Q9UGF6 321 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 AURKCQ9UQB9 309 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 FADS3Q9Y5Q0 445 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 FAM169AQ9Y6X4 670 aa-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 USP9XQ93008 2570 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-542P-201ENST00000516405 WDR87Q6ZQQ6 2873 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 A0A0B4J2A0 478 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 OR2T1O43869 369 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 TOM1O60784 492 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 SEMA3DO95025 777 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 CRYGBP07316 175 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 RPSAP08865 295 aaKnown RBP-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 RNASE3P12724 160 aaKnown RBP-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 ETS1P14921 441 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 CD36P16671 472 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 ZNF25P17030 456 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 RAB3AP20336 220 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 USF1P22415 310 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 SPINT3P49223 89 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 RORCP51449 518 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 SMSP52788 366 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 NUTF2P61970 127 aaKnown RBP-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 ZMYND11Q15326 602 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 TMEM155Q4W5P6 130 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 TRMT12Q53H54 448 aaKnown RBP-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 ERMARDQ5T6L9 678 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 TEX36Q5VZQ5 186 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 RBM45Q8IUH3 476 aaKnown RBP-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 EFCAB13Q8IY85 973 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 COX18Q8N8Q8 333 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 SLC25A29Q8N8R3 303 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 IQUBQ8NA54 791 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 OR10P1Q8NGE3 313 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 INTS14Q96SY0 518 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 ZBTB18Q99592 522 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 TUBGCP2Q9BSJ2 902 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 NAA11Q9BSU3 229 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 TCHPQ9BT92 498 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 ANKRD2Q9GZV1 360 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 NAPBQ9H115 298 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 PLEKHF2Q9H8W4 249 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 ACTR8Q9H981 624 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 RDH14Q9HBH5 336 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 THUMPD1Q9NXG2 353 aaKnown RBP-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 PIPOXQ9P0Z9 390 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 PISDQ9UG56 409 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 SHPKQ9UHJ6 478 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 PPIL1Q9Y3C6 166 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 LHFPL6Q9Y693 200 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 PKHD1L1Q86WI1 4243 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 ZNF532Q9HCE3 1301 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 MED13LQ71F56 2210 aa-2.25□□□□□ -2.77
RNU6-542P-201ENST00000516405 CENPBD1B2RD01 187 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 STX7O15400 261 aaKnown RBP-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 RS1O15537 224 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 CCL5P13501 91 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 YAP1P46937 504 aaKnown RBP-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 CAPZA2P47755 286 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 CEBPDP49716 269 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 CAPZA1P52907 286 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 TSTA3Q13630 321 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 ANKRD37Q7Z713 158 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 CDR2LQ86X02 465 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 MS4A15Q8N5U1 240 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 CSGALNACT2Q8N6G5 542 aa-2.26□□□□□ -2.77
RNU6-542P-201ENST00000516405 FNDC5Q8NAU1 212 aa-2.26□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms