RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 RPS27P42677 84 aaKnown RBP11.88□□□□□ -0.51
TCOF1-213ENST00000514442 PRTGQ2VWP7 1150 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 ZNF660Q6AZW8 331 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-213ENST00000514442 LDLRAD3Q86YD5 345 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 FAM24BQ8N5W8 94 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 NT5CQ8TCD5 201 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 C12orf49Q9H741 205 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 CHRNA9Q9UGM1 479 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 A0A1W2PPH5 198 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 CYB5BO43169 146 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 FABP4P15090 132 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 CPEB2Q7Z5Q1 589 aaKnown RBP11.88□□□□□ -0.51
TCOF1-213ENST00000514442 CPT1CQ8TCG5 803 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 CA5BP1Q8WTZ4 195 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 BCL2L10Q9HD36 194 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 FBXO7Q9Y3I1 522 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 PIAS2O75928 621 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 OR2J2O76002 312 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 GP1BAP07359 652 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 EDN3P14138 238 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 HOXB9P17482 250 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-213ENST00000514442 RRADP55042 308 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 VHLLQ6RSH7 139 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 OR5M8Q8NGP6 311 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 IL1F10Q8WWZ1 152 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 OBP2BQ9NPH6 170 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 DNAJB11Q9UBS4 358 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 LOXL2Q9Y4K0 774 aa11.88□□□□□ -0.51
TCOF1-213ENST00000514442 DOCK3Q8IZD9 2030 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 MLC1Q15049 377 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 MOGAT2Q3SYC2 334 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 TSSK2Q96PF2 358 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 A0A087WV62 115 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 RPL27P61353 136 aaKnown RBP11.87□□□□□ -0.51
TCOF1-213ENST00000514442 MESP2Q0VG99 397 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 FAM53BQ14153 422 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 ZNF813Q6ZN06 617 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 SLC43A2Q8N370 569 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 MRPS2Q9Y399 296 aaKnown RBP11.87□□□□□ -0.51
TCOF1-213ENST00000514442 CX3CR1P49238 355 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 PKIAP61925 76 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 GABREP78334 506 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 SLC35D3Q5M8T2 416 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 STAC2Q6ZMT1 411 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 PLPP7Q8NBV4 271 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 HPSE2Q8WWQ2 592 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 DMRT1Q9Y5R6 373 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 PTPRZ1P23471 2315 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-213ENST00000514442 SERTM1A2A2V5 107 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 SEC14L6B5MCN3 397 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 ATP1B3P54709 279 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 ARL6IP1Q15041 203 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 C19orf48Q6RUI8 117 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 MEX3BQ6ZN04 569 aaKnown RBP11.87□□□□□ -0.51
TCOF1-213ENST00000514442 ADGRE4PQ86SQ3 457 aa11.87□□□□□ -0.51
TCOF1-213ENST00000514442 hCG_1809904A0A1W2PP81 198 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 A0A1W2PR64 198 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 A0A1W2PRV1 198 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 HSPB6O14558 160 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 GLSO94925 669 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-213ENST00000514442 MT-ATP6P00846 226 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 MTCP1P56278 107 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 MFAP5Q13361 173 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 GUSBP11Q6P575 273 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 SULF2Q8IWU5 870 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 OR2I1PQ8NGU4 316 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 FGGYQ96C11 551 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 SIGLEC11Q96RL6 698 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 OR14J1Q9UGF5 321 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 LILRA5A6NI73 299 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 PTHLHP12272 177 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 RAC2P15153 192 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 RAB5AP20339 215 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 GPR32P1Q8NGA4 272 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 SYT3Q9BQG1 590 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 FSCN3Q9NQT6 498 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 IGHV5-51A0A0C4DH38 117 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 BHLHE40O14503 412 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 EIF1BO60739 113 aaKnown RBP11.86□□□□□ -0.51
TCOF1-213ENST00000514442 TMEM91Q6ZNR0 172 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 ZNF709Q8N972 641 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 TEX19Q8NA77 164 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 FRZBQ92765 325 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 COX14Q96I36 57 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 ZMAT3Q9HA38 289 aaKnown RBP11.86□□□□□ -0.51
TCOF1-213ENST00000514442 ING1Q9UK53 422 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-213ENST00000514442 ZNF346Q9UL40 294 aaKnown RBP11.86□□□□□ -0.51
TCOF1-213ENST00000514442 STRAPQ9Y3F4 350 aaKnown RBP11.86□□□□□ -0.51
TCOF1-213ENST00000514442 IGHV1OR15-9A0A0B4J2B8 117 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 C5orf67F2Z3F1 127 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 SLC33A1O00400 549 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-213ENST00000514442 PCBP3P57721 371 aaKnown RBP11.86□□□□□ -0.51
TCOF1-213ENST00000514442 CTAG1AP78358 180 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 MFGE8Q08431 387 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-213ENST00000514442 ACKR1Q16570 336 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 EXOSC6Q5RKV6 272 aaKnown RBP11.86□□□□□ -0.51
TCOF1-213ENST00000514442 ABHD5Q8WTS1 349 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 NUDCD2Q8WVJ2 157 aa11.86□□□□□ -0.51
TCOF1-213ENST00000514442 GABRG3Q99928 467 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms