RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 NEURL1O76050 574 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 PPP1R17O96001 155 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 RPLP1P05386 114 aaKnown RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 ELK1P19419 428 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 CTSCP53634 463 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 EVX2Q03828 476 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 ZNF181Q2M3W8 571 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 FAM27D1Q5T7N8 215 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 C1orf185Q5T7R7 199 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 RHOUQ7L0Q8 258 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 SLC25A42Q86VD7 318 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 OR8I2Q8N0Y5 310 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 APOBEC3DQ96AK3 386 aaPredicted RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 E9PCH4 1651 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 CDHR4A6H8M9 788 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 MBTPS2O43462 519 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 SMAD6O43541 496 aaKnown RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 DUS4LO95620 317 aaKnown RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 NID1P14543 1247 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 PIGAP37287 484 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 KIR2DS2P43631 304 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 ATP4BP51164 291 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 EBPQ15125 230 aaKnown RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 ACKR1Q16570 336 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 DGAT2L6Q6ZPD8 337 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 GTSCR1Q86UQ5 136 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 BAHD1Q8TBE0 780 aaPredicted RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 DEDD2Q8WXF8 326 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 CGGBP1Q9UFW8 167 aaPredicted RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 ANXA10Q9UJ72 324 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 LRRC7Q96NW7 1537 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 QRICH2Q9H0J4 1663 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 TEX50A0A1B0GTY4 177 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 ARPC1BO15143 372 aaKnown RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 IAPPP10997 89 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 ZNF85Q03923 595 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 ALKBH1Q13686 389 aaKnown RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 WDR25Q64LD2 544 aaPredicted RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 LIAT1Q6ZQX7 453 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 CT55Q8WUE5 264 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 NSUN5Q96P11 429 aaKnown RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 RNF2Q99496 336 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 SAV1Q9H4B6 383 aaPredicted RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 FZD6O60353 706 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 CIDEAO60543 219 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 KRASP01116 189 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 FGF2P09038 288 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 CCR9P51686 369 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 GFRA1P56159 465 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 KDM8Q8N371 416 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 GPR26Q8NDV2 337 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 OR4B1Q8NGF8 309 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 CMBLQ96DG6 245 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 NEIL1Q96FI4 390 aaPredicted RBP8.09□□□□□ -1.11
VCAN-208ENST00000512590 ANKRD60Q9BZ19 345 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 SPNS1Q9H2V7 528 aa8.09□□□□□ -1.11
VCAN-208ENST00000512590 SLIT1O75093 1534 aa8.09□□□□□ -1.12
VCAN-208ENST00000512590 FRG2CA6NGY1 282 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 PPM1DO15297 605 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 ICMTO60725 284 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 TNFRSF1BP20333 461 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 TGFBR1P36897 503 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 GPM6AP51674 278 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 DNAJB13P59910 316 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 CLEC12BQ2HXU8 276 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 DCAF12L2Q5VW00 463 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 MRGPRGQ86SM5 289 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 DUSP18Q8NEJ0 188 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 OR1B1Q8NGR6 318 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 CNIH3Q8TBE1 160 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 ZNF426Q9BUY5 554 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 KIR3DX1Q9H7L2 352 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 GLRX2Q9NS18 164 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 CD300AQ9UGN4 299 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 SLC22A13Q9Y226 551 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 FRMPD1Q5SYB0 1578 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 DEFB108AA8MXU0 73 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 M0R3E3 92 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 CRPP02741 224 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 P2RX3P56373 397 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 LDLRAD1Q5T700 205 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 TRAT1Q6PIZ9 186 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 SSX8Q7RTT4 187 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 IRF2BP2Q7Z5L9 587 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 FAM219AQ8IW50 185 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 INPP5EQ9NRR6 644 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 TMEM72A0PK05 275 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 SHC1P29353 583 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 SOX4Q06945 474 aaPredicted RBP8.08□□□□□ -1.12
VCAN-208ENST00000512590 CLEC17AQ6ZS10 378 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 OR4D9Q8NGE8 314 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 OR9I1Q8NGQ6 314 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 MARCH1Q8TCQ1 289 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 TMEM18Q96B42 140 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 RSG1Q9BU20 258 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 INSIG2Q9Y5U4 225 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 OIP5O43482 229 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 PRSS1P07477 247 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 OR3A1P47881 315 aa8.08□□□□□ -1.12
VCAN-208ENST00000512590 AESQ08117 197 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms