RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 V9GY05 133 aa7.08□□□□□ -1.28
HTT-209ENST00000512068 NCOA6Q14686 2063 aaPredicted RBP7.08□□□□□ -1.28
HTT-209ENST00000512068 WDFY3Q8IZQ1 3526 aa7.08□□□□□ -1.28
HTT-209ENST00000512068 DOCK7Q96N67 2140 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 A0A087WV48 116 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 TMEM8BA6NDV4 472 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 K7EM74 188 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 SMAD7O15105 426 aaKnown RBP7.07□□□□□ -1.28
HTT-209ENST00000512068 MAGEB3O15480 346 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 SRSF10O75494 262 aaKnown RBP7.07□□□□□ -1.28
HTT-209ENST00000512068 CNOT4O95628 575 aaKnown RBP7.07□□□□□ -1.28
HTT-209ENST00000512068 PNPP00491 289 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 LCATP04180 440 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 CRHP06850 196 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 ERCC1P07992 297 aaPredicted RBP7.07□□□□□ -1.28
HTT-209ENST00000512068 ACSM4P0C7M7 580 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 TMIGD3P0DMS9 266 aaPredicted RBP7.07□□□□□ -1.28
HTT-209ENST00000512068 SLC2A1P11166 492 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 CD40LGP29965 261 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 APLNRP35414 380 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 INPP1P49441 399 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 CASP6P55212 293 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 HIST1H3AP68431 136 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 HIST2H3PS2Q5TEC6 136 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 ZNF774Q6NX45 483 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 ANKRD16Q6P6B7 361 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 FAM131AQ6UXB0 335 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 GFRALQ6UXV0 394 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 STAC2Q6ZMT1 411 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 C22orf34Q6ZV56 151 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 HIST2H3AQ71DI3 136 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 LINGO2Q7L985 606 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 ADGRE4PQ86SQ3 457 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 CDH24Q86UP0 819 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 SERPINA12Q8IW75 414 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 CCDC36Q8IYA8 594 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 NKAIN3Q8N8D7 197 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 IL17RDQ8NFM7 739 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 OR8B12Q8NGG6 310 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 AKR7LQ8NHP1 331 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 FAM57AQ8TBR7 257 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 TRMT10AQ8TBZ6 339 aaKnown RBP7.07□□□□□ -1.28
HTT-209ENST00000512068 OR51E1Q8TCB6 317 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 RGP1Q92546 391 aaPredicted RBP7.07□□□□□ -1.28
HTT-209ENST00000512068 FBXO17Q96EF6 278 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 FAM71F1Q96KD3 344 aaPredicted RBP7.07□□□□□ -1.28
HTT-209ENST00000512068 WDFY2Q96P53 400 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 BARHL1Q9BZE3 327 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 TP63Q9H3D4 680 aaPredicted RBP7.07□□□□□ -1.28
HTT-209ENST00000512068 ABCB9Q9NP78 766 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 PNRC2Q9NPJ4 139 aaKnown RBP7.07□□□□□ -1.28
HTT-209ENST00000512068 AKIP1Q9NQ31 210 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 G6PC2Q9NQR9 355 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 ABRACLQ9P1F3 81 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 MALT1Q9UDY8 824 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 PLEKHB1Q9UF11 243 aaPredicted RBP7.07□□□□□ -1.28
HTT-209ENST00000512068 PRSS50Q9UI38 385 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 ATPIF1Q9UII2 106 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 FOXJ3Q9UPW0 622 aa7.07□□□□□ -1.28
HTT-209ENST00000512068 FREM1Q5H8C1 2179 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 TRBV5-7A0A0A0MS05 114 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 FABP12A6NFH5 140 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 ANKRD61A6NGH8 418 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 J3QRK9 145 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 AIPO00170 330 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 CTDSP2O14595 271 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 DVL2O14641 736 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 SYNGR3O43761 229 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 TTRP02766 147 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 C1QTNF9P0C862 333 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 COX5BP10606 129 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 SFTPCP11686 197 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 RAB3AP20336 220 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 CCNOP22674 350 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 CTSSP25774 331 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 CAPZA1P52907 286 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 PPP5CP53041 499 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 OR10A3P58181 314 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 DEFA1P59665 94 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 DEFA3P59666 94 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 PSG4Q00888 419 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 MALLQ13021 153 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 MRPL49Q13405 166 aaKnown RBP7.06□□□□□ -1.28
HTT-209ENST00000512068 IL18Q14116 193 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 PABPC1L2AQ5JQF8 200 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 HES5Q5TA89 166 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 TFAP2EQ6VUC0 442 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 PGAP1Q75T13 922 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 LRRC28Q86X40 367 aaPredicted RBP7.06□□□□□ -1.28
HTT-209ENST00000512068 LAX1Q8IWV1 398 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 SKA3Q8IX90 412 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 CISD2Q8N5K1 135 aaKnown RBP7.06□□□□□ -1.28
HTT-209ENST00000512068 SAMD12Q8N8I0 201 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 C9orf106Q8NAJ2 232 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 OR51A4Q8NGJ6 313 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 OR5D14Q8NGL3 314 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 OR1K1Q8NGR3 316 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 OR10AC1Q8NH08 325 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 ASB5Q8WWX0 329 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 AKAP1Q92667 903 aaKnown RBP eCLIP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms